Gene: Solyc03g120280.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g120280.1
  • Transcript Identifier Solyc03g120280.1.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 63171069-63172418 : positive

Gene Family Information

  • ID HOM05D003909
  • #Genes/#Species 178/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g120280.1.1
  • uniprot A0A3Q7FTH5
  • gene_id Solyc03g120280

Descriptions

  • Description Nuclear pore complex protein NUP50A (AHRD V3.3 *** A0A2G2WQ64_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046907
IEA
GOA Databaseintracellular transport
GO:0046907
IEA
InterProintracellular transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IBA
GOA DatabaseGTPase activator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G52380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IBA
IEA
GOA Databasenuclear pore
GO:0005643
IEA
InterPronuclear pore
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
IBA
GOA Databasecytosol
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000156 Ran binding domain
IPR011993 PH-like domain superfamily
IPR015007 Nuclear pore complex, NUP2/50/61
Mapman id Description
23.5.1.1.5.1 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUP50)