Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG6G15650 | LG-6 | - | View | |
Acer truncatum | Atru.chr4.307 | chr4 | + | View | |
Arabidopsis lyrata | AL7G11770 | scaffold_7 | + | View | |
Avicennia marina | MSTRG.2541 | ScioBoG_102835_HRSCAF_103059 | + | View | |
Aquilegia oxysepala | Aqoxy6G00504 | CHR06 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.S4ITMM | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | arahy.Tifrunner.gnm1.Arahy.03 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.N3YXA0 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
Arabidopsis thaliana | AT4G39620 | Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2453 (EMB2453)%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1)%3B Has 39741 Blast hits to 13102 proteins in 279 species: Archae - 3%3B Bacteria - 42%3B Metazoa - 323%3B Fungi - 447%3B Plants - 37702%3B Viruses - 0%3B Other Eukaryotes - 1224 (source: NCBI BLink). | Chr4 | + | View |
Beta vulgaris | EL10Ac6g14730 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Chr6_EL10_PGA_scaffold0 | - | View |
Cicer arietinum L. | Ca_17703_v3 | Ca_LG6_v3 | + | View | |
Coffea canephora | Cc07_g15860 | Putative Pentatricopeptide repeat-containing protein At1g74850, chloroplastic | chr7 | - | View |
Citrus clementina | Ciclev10025440m.g | scaffold_7 | + | View | |
Cardamine hirsuta | CARHR247110 | Pentatricopeptide repeat-containing protein | Chr7 | - | View |
Carya illinoinensis | CiPaw.04G093800 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Chr04 | + | View |
Citrullus lanatus | ClCG01G019140 | Pentatricopeptide repeat-containing protein, putative | CG_Chr01 | - | View |
Cucumis melo | MELO3C007791.2 | Pentatricopeptide repeat-containing family protein | chr08 | - | View |
Chenopodium quinoa | AUR62016261 | EMB2453: Pentatricopeptide repeat-containing protein At4g39620, chloroplastic | C_Quinoa_Scaffold_3514 | - | View |
Chenopodium quinoa | AUR62003321 | EMB2453: Pentatricopeptide repeat-containing protein At4g39620, chloroplastic | C_Quinoa_Scaffold_1000 | + | View |
Capsella rubella | Carub.0007s0149 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_7 | + | View |
Cucumis sativus L. | CsaV3_6G045830 | pentatricopeptide repeat-containing protein At4g39620, chloroplastic | chr6 | - | View |
Davidia involucrata | Dinv19511 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib147G0014 | NW_019168470.1 | + | View | |
Eucalyptus grandis | Eucgr.I00342 | Chr09 | + | View | |
Erythranthe guttata | Migut.H02413 | scaffold_8 | - | View | |
Gossypium hirsutum | Gohir.A10G086500 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | A10 | - | View |
Glycine max | Glyma.05G182700 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Gm05 | - | View |
Glycine max | Glyma.08G140300 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Gm08 | - | View |
Lupinus albus | Lalb_Chr07g0184891 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Lalb_Chr07 | + | View |
Lotus japonicus | Lj4g0018166 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | chr4 | + | View |
Lonicera japonica | Lj2A560T64 | GWHAAZE00000002 | - | View | |
Manihot esculenta | Manes.12G140500 | Chromosome12 | - | View | |
Medicago truncatula | Medtr8g091670 | PPR containing plant-like protein | chr8 | - | View |
Nelumbo nucifera | Nn1g05205 | chr1 | + | View | |
Pisum sativum | Psat7g051760 | PPR repeat family | chr7LG7 | - | View |
Populus trichocarpa | Potri.005G082400 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Chr05 | + | View |
Populus trichocarpa | Potri.007G084750 | PF01535 - PPR repeat (PPR) | Chr07 | + | View |
Phaseolus vulgaris | Phvul.002G263600 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Chr02 | - | View |
Quercus lobata | QL06p032569 | 6 | + | View | |
Rhododendron simsii | Rhsim08G0008000 | chr08 | - | View | |
Salix brachista | Sabra05G0067400 | GWHAAZH00000005 | + | View | |
Sechium edule | Sed0012904 | LG10 | - | View | |
Solanum lycopersicum | Solyc04g054270.4 | Pentatricopeptide repeat (AHRD V3.3 *** A0A200PQB4_9MAGN) | SL4.0ch04 | + | View |
Schrenkiella parvula | Sp7g36270 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | ch7-6 | - | View |
Solanum pennellii | Sopen04g023860 | EMBRYO DEFECTIVE 2453 (EMB2453) | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 ., Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) | Spenn-ch04 | + | View |
Solanum tuberosum | PGSC0003DMG400012802 | Pentatricopeptide repeat-containing protein | ST4.03ch04 | - | View |
Trochodendron aralioides | TAR376G1012 | group14 | + | View | |
Theobroma cacao | Thecc.01G110400 | Tetratricopeptide repeat (TPR)-like superfamily protein | Chromosome_1 | - | View |
Tarenaya hassleriana | THA.LOC104807720 | pentatricopeptide repeat-containing protein At4g39620%2C chloroplastic | NW_010963495.1 | - | View |
Trifolium pratense | TPR.G2171 | Tp57577_TGAC_v2_LG3 | + | View | |
Tripterygium wilfordii | TWI74G0679 | NC_052234.1 | - | View | |
Vaccinium macrocarpon | vmacro18623 | Similar to EMB2453: Pentatricopeptide repeat-containing protein At4g39620, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr3_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0251G3283 | CM024069.1 | - | View | |
Vitis vinifera | GSVIVG01022204001 | chr7 | - | View |