Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Potri.006G075500 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL Chr06 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G20610 LG-2 + View
Acer truncatum Atru.chr7.756 chr7 - View
Actinidia chinensis Actinidia02501 Lachesis_group10 - View
Arabidopsis lyrata AL7G22300 scaffold_7 + View
Aquilegia oxysepala Aqoxy7G02805 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XG21R6 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XV9VLA PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FTH9FU PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT4G29940 pathogenesis related homeodomain protein A Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin%2C naphthalene acetic acid%2C in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding. pathogenesis related homeodomain protein A (PRHA)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Homeobox (InterPro:IPR001356)%2C Homeodomain-like (InterPro:IPR009057)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G19510.1)%3B Has 20197 Blast hits to 13808 proteins in 1056 species: Archae - 100%3B Bacteria - 2032%3B Metazoa - 7887%3B Fungi - 1709%3B Plants - 882%3B Viruses - 177%3B Other Eukaryotes - 7410 (source: NCBI BLink). pathogenesis related homeodomain protein A (PRHA)%3B CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Homeodomain-like (InterPro:IPR009057)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G19510.1). Chr4 - View
Amborella trichopoda ATR0626G154 AmTr_v1.0_scaffold00025 - View
Brassica napus A01p08160 A01 + View
Brassica napus C01p09130 C01 + View
Brassica napus C03p88990 C03 + View
Brassica oleracea BolC1t00904H C1 + View
Brassica rapa BraA01t00764Z A01 + View
Cannabis sativa CANSAT11G2326 NC_044377.1 - View
Cicer arietinum L. Ca_02107_v3 Ca_LG1_v3 + View
Citrus clementina Ciclev10007587m.g scaffold_1 - View
Ceratophyllum demersum CDE02G1020 1 - View
Carpinus fangiana Cfa013452 Cfa05 + View
Cardamine hirsuta CARHR237860 pathogenesis related homeodomain protein A Chr7 - View
Carya illinoinensis CiPaw.07G197000 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL Chr07 + View
Carya illinoinensis CiPaw.08G032600 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL Chr08 - View
Citrullus lanatus ClCG06G013600 Pathogenesis-related homeodomain protein CG_Chr06 + View
Cucumis melo MELO3C017429.2 pathogenesis-related homeodomain protein chr02 + View
Carica papaya Cpa.g.sc95.11 supercontig_95 - View
Capsella rubella Carub.0007s1070 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL scaffold_7 + View
Cucumis sativus L. CsaV3_1G031870 pathogenesis-related homeodomain protein chr1 + View
Daucus carota DCAR_020149 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv25444 GWHABJS00000001 - View
Davidia involucrata Dinv41174 GWHABJS00000013 + View
Erigeron canadensis ECA240G0470 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.C00114 Chr03 - View
Erythranthe guttata Migut.J00799 scaffold_10 - View
Eutrema salsugineum Thhalv10024489m.g scaffold_1 + View
Fragaria x ananassa FAN22G1886 PTHR12628:SF10 - POLYCOMB PROTEIN PCL Fvb4-1 - View
Fragaria x ananassa FAN07G2529 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL Fvb4-4 + View
Fragaria x ananassa FAN12G0633 PTHR12628:SF10 - POLYCOMB PROTEIN PCL Fvb4-3 + View
Fragaria x ananassa FAN17G2190 PTHR12628:SF10 - POLYCOMB PROTEIN PCL Fvb4-2 - View
Fragaria vesca FvH4_4g07290 PTHR12628:SF10 - POLYCOMB PROTEIN PCL Fvb4 - View
Gossypium hirsutum Gohir.D05G002900 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL D05 - View
Gossypium hirsutum Gohir.A05G002300 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL A05 - View
Glycine max Glyma.13G100500 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL Gm13 + View
Glycine max Glyma.09G059700 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL Gm09 + View
Glycine max Glyma.15G166200 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL Gm15 + View
Gossypium raimondii Gorai.009G002500 Chr09 - View
Lupinus albus Lalb_Chr11g0074731 PTHR12628:SF10 - POLYCOMB PROTEIN PCL Lalb_Chr11 - View
Lupinus albus Lalb_Chr13g0300011 PTHR12628:SF10 - POLYCOMB PROTEIN PCL Lalb_Chr13 - View
Lotus japonicus Lj6g0002831 PTHR12628:SF10 - POLYCOMB PROTEIN PCL chr6 - View
Lactuca sativa Lsat_1_v5_gn_7_56301 Lsat_1_v8_lg_7 - View
Malus domestica MD13G1241800 pathogenesis related homeodomain protein A Chr13 - View
Malus domestica MD16G1248700 pathogenesis related homeodomain protein A Chr16 - View
Medicago truncatula Medtr2g038000 pathogenesis-related homeodomain-like protein, putative chr2 + View
Nelumbo nucifera Nn8g40782 chr8 - View
Nicotiana tabacum Nitab4.5_0000617g0060 Zinc finger, PHD-finger, Zinc finger, PHD-type, conserved site, Homeobox domain, Homeodomain-like, Zinc finger, RING/FYVE/PHD-type, Zinc finger, FYVE/PHD-type, Zinc finger, PHD-type Nitab4.5_0000617 + View
Olea europaea Oeu018818.1 scaffold1797 + View
Punica granatum PGR142G2981 NC_045128.1 + View
Prunus persica Prupe.1G075500 Pp01 - View
Pisum sativum Psat1g144080 PHD-finger chr1LG6 - View
Phaseolus vulgaris Phvul.003G141400 Chr03 + View
Phaseolus vulgaris Phvul.009G236200 Chr09 - View
Rosa chinensis RcHm_v2.0_Chr4g0399601 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim01G0117100 chr01 - View
Salix brachista Sabra06G0056400 GWHAAZH00000006 - View
Salix brachista Sabra18G0116300 GWHAAZH00000018 - View
Sechium edule Sed0028125 LG08 - View
Sechium edule Sed0011029 LG12 - View
Solanum lycopersicum Solyc07g008730.2 Pathogenesis-related homeodomain protein (AHRD V3.3 *** A0A1U8H9N2_CAPAN) SL4.0ch07 - View
Schrenkiella parvula Sp7g27750 PTHR12628//PTHR12628:SF10 - POLYCOMB-LIKE TRANSCRIPTION FACTOR // POLYCOMB PROTEIN PCL ch7-5 - View
Solanum pennellii Sopen07g004650 Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding. | pathogenesis related homeodomain protein A (PRHA) | CONTAINS InterPro DOMAIN/s: Homeobox , Zinc finger, PHD-type, conserved site , Homeodomain-like , Zinc finger, PHD-type , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain ., Homeobox protein HOX1A - Zea mays (Maize) Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400028740 Conserved gene of unknown function ST4.03ch07 - View
Theobroma cacao Thecc.09G186000 Pathogenesis related homeodomain protein A Chromosome_9 + View
Tarenaya hassleriana THA.LOC104814652 pathogenesis-related homeodomain protein isoform X1 NW_010965451.1 - View
Tripterygium wilfordii TWI34G1415 NC_052235.1 + View
Vaccinium macrocarpon vmacro20815 Similar to PRH: Pathogenesis-related homeodomain protein (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0644 CM024074.1 + View
Vigna mungo VMungo1309G0834 CM024072.1 + View
Vitis vinifera GSVIVG01010860001 chr11 + View