Gene: ATR0626G154

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0626G154
  • Transcript Identifier ATR0626G154.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00025 : 2461016-2472238 : negative

Gene Family Information

  • ID HOM05D002228
  • #Genes/#Species 302/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00025.181.v1.0
  • pacid 31566340

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT4G29940
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT4G29940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G29940
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G29940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001356 Homeobox domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
Mapman id Description
15.5.3.8 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (PHD)