Gene: PGSC0003DMG400028740

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400028740
  • Transcript Identifier PGSC0003DMT400073955
  • Gene Type Coding gene
  • Location ST4.03ch07 : 6333109-6341436 : negative

Gene Family Information

  • ID HOM05D002228
  • #Genes/#Species 302/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37431230
  • id PGSC0003DMG400028740.v4.03
  • uniprot M1CSX1

Descriptions

  • Description Conserved gene of unknown function
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT4G29940
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT4G29940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G29940
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G29940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011011 Zinc finger, FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR009057 Homeobox-like domain superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001356 Homeobox domain
Mapman id Description
15.5.3.8 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (PHD)