Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.472 chr1 + View
Actinidia chinensis Actinidia34106 Lachesis_group3 - View
Arabidopsis lyrata AL7G27560 scaffold_7 + View
Amaranthus hybridus Ah.07g207270 DNA mismatch repair protein MSH3 (AtMSH3) (MutS protein homolog 3) AmaHy_arrow1_Scaffold_7 + View
Aquilegia oxysepala Aqoxy7G00378 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.353VBZ K08736 - DNA mismatch repair protein MSH3 (MSH3) arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U4UA85 K08736 - DNA mismatch repair protein MSH3 (MSH3) arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT4G25540 homolog of DNA mismatch repair protein MSH3 encodes a DNA mismatch repair homolog of human MutS gene%2C MSH6. There are four MutS genes in Arabidopsis%2C MSH2%2C MSH3%2C MSH6%2C and MSH7%2C which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G). homolog of DNA mismatch repair protein MSH3 (MSH3)%3B CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS%2C clamp (InterPro:IPR007861)%2C DNA mismatch repair protein MutS%2C connector (InterPro:IPR007860)%2C DNA mismatch repair protein MutS%2C N-terminal (InterPro:IPR016151)%2C DNA mismatch repair protein MutS%2C core (InterPro:IPR007696)%2C DNA mismatch repair protein MutS%2C C-terminal (InterPro:IPR000432)%2C DNA mismatch repair protein MutS-like%2C N-terminal (InterPro:IPR007695)%3B BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2)%3B Has 14547 Blast hits to 13713 proteins in 2703 species: Archae - 153%3B Bacteria - 9793%3B Metazoa - 705%3B Fungi - 864%3B Plants - 451%3B Viruses - 3%3B Other Eukaryotes - 2578 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0680G072 AmTr_v1.0_scaffold00009 + View
Brassica carinata BcaC06g32803 ChrC06 + View
Brassica napus A03p56070 A03 - View
Brassica napus A01p16810 A01 - View
Brassica napus C01p21090 C01 - View
Brassica napus C07p54390 C07 - View
Brassica oleracea BolC1t02033H C1 - View
Brassica oleracea BolC7t45925H C7 - View
Brassica rapa BraA03t14678Z A03 - View
Brassica rapa BraA01t01635Z A01 - View
Beta vulgaris EL10Ac3g05663 K08736 - DNA mismatch repair protein MSH3 (MSH3) Chr3_EL10_PGA_scaffold7 + View
Camellia sinensis var. sinensis CSS0048539 PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Vitis vinifera] Chr1 - View
Cicer arietinum L. Ca_10778_v3 Ca_LG4_v3 + View
Corylus avellana Haze_13724 Similar to MSH3: DNA mismatch repair protein MSH3 (Arabidopsis thaliana OX%3D3702) 5 + View
Citrus clementina Ciclev10004302m.g scaffold_9 - View
Ceratophyllum demersum CDE11G1074 9 + View
Carpinus fangiana Cfa008311 Cfa03 - View
Cardamine hirsuta CARHR232960 DNA mismatch repair protein mutS Chr7 - View
Carya illinoinensis CiPaw.03G105500 K08736 - DNA mismatch repair protein MSH3 (MSH3) Chr03 - View
Citrullus lanatus ClCG05G007980 DNA mismatch repair protein MutS CG_Chr05 - View
Cucumis melo MELO3C006901.2 DNA mismatch repair protein MSH3 chr06 - View
Corchorus olitorius COL.COLO4_14300 hypothetical protein AWUE01015408.1 - View
Carica papaya Cpa.g.sc107.43 supercontig_107 - View
Chenopodium quinoa AUR62021201 MSH3: DNA mismatch repair protein MSH3 C_Quinoa_Scaffold_1783 + View
Chenopodium quinoa AUR62015994 MSH3: DNA mismatch repair protein MSH3 C_Quinoa_Scaffold_3256 + View
Capsella rubella Carub.0007s1544 K08736 - DNA mismatch repair protein MSH3 (MSH3) scaffold_7 + View
Cucumis sativus L. CsaV3_3G017020 DNA mismatch repair protein MutS chr3 - View
Daucus carota DCAR_009363 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv28450 GWHABJS00000004 + View
Durio zibethinus Duzib205G0347 NW_019168381.1 - View
Erigeron canadensis ECA233G1964 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.K00248 Chr11 - View
Erythranthe guttata Migut.F00349 scaffold_6 + View
Eutrema salsugineum Thhalv10024274m.g K08736 - DNA mismatch repair protein MSH3 (MSH3) scaffold_1 + View
Fragaria x ananassa FAN01G0948 PTHR11361:SF34 - DNA MISMATCH REPAIR PROTEIN MSH3 Fvb7-4 + View
Fragaria x ananassa FAN03G0437 K08736 - DNA mismatch repair protein MSH3 (MSH3) Fvb7-3 + View
Fragaria x ananassa FAN10G0894 K08736 - DNA mismatch repair protein MSH3 (MSH3) Fvb7-1 - View
Fragaria vesca FvH4_7g29360 K08736 - DNA mismatch repair protein MSH3 (MSH3) Fvb7 - View
Gossypium hirsutum Gohir.D12G259600 K08736 - DNA mismatch repair protein MSH3 (MSH3) D12 + View
Gossypium hirsutum Gohir.A12G258300 K08736 - DNA mismatch repair protein MSH3 (MSH3) A12 + View
Glycine max Glyma.10G236802 PTHR11361:SF34 - DNA MISMATCH REPAIR PROTEIN MSH3 Gm10 + View
Glycine max Glyma.20G157600 K08736 - DNA mismatch repair protein MSH3 (MSH3) Gm20 - View
Gossypium raimondii Gorai.008G278000 Chr08 + View
Hydrangea macrophylla Hma1.2p1_2482F.1_g322970 Hma1.2p1_2482F.1 + View
Lupinus albus Lalb_Chr06g0161081 K08736 - DNA mismatch repair protein MSH3 (MSH3) Lalb_Chr06 - View
Lotus japonicus Lj5g0016766 K08736 - DNA mismatch repair protein MSH3 (MSH3) chr5 - View
Lonicera japonica Lj1A996G55 GWHAAZE00000001 - View
Magnolia biondii MBI18_g09768_MAGBIO AED:0.12 Chr18 - View
Malus domestica MD07G1267600 homolog of DNA mismatch repair protein MSH3 Chr07 - View
Manihot esculenta Manes.14G026600 Chromosome14 + View
Medicago truncatula Medtr1g100683 DNA mismatch repair MSH3-like protein chr1 + View
Nelumbo nucifera Nn1g01435 chr1 - View
Nicotiana tabacum Nitab4.5_0003365g0010 DNA mismatch repair protein MutS, C-terminal, DNA mismatch repair protein MutS-like, N-terminal, DNA mismatch repair protein MutS, connector domain, P-loop containing nucleoside triphosphate hydrolase, DNA mismatch repair protein MutS, core, DNA mismatch repair protein MutS, N-terminal, DNA mismatch repair protein MutS, clamp Nitab4.5_0003365 + View
Nicotiana tabacum Nitab4.5_0000716g0140 DNA mismatch repair protein MutS, C-terminal, DNA mismatch repair protein MutS, core, DNA mismatch repair protein MutS, N-terminal, DNA mismatch repair protein MutS-like, N-terminal, P-loop containing nucleoside triphosphate hydrolase, DNA mismatch repair protein MutS, clamp Nitab4.5_0000716 + View
Olea europaea Oeu022585.1 chr1 - View
Punica granatum PGR142G2564 NC_045128.1 + View
Prunus persica Prupe.2G293300 K08736 - DNA mismatch repair protein MSH3 (MSH3) Pp02 - View
Pisum sativum Psat6g199840 MutS domain V chr6LG2 + View
Populus trichocarpa Potri.015G142900 K08736 - DNA mismatch repair protein MSH3 (MSH3) Chr15 - View
Phaseolus vulgaris Phvul.007G069100 K08736 - DNA mismatch repair protein MSH3 (MSH3) Chr07 - View
Quercus lobata QL09p014380 9 + View
Rosa chinensis RcHm_v2.0_Chr1g0377121 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim03G0180100 chr03 - View
Striga asiatica SGA_v2.0_scaffold44G16715 scaffold44 - View
Salvia bowleyana SalBow4G2537 GWHASIU00000008 + View
Sechium edule Sed0018541 LG13 + View
Sapria himalayana SHI13790 scaffold21_10161493 - View
Solanum lycopersicum Solyc03g025890.2 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200QUI6_9MAGN) SL4.0ch03 + View
Schrenkiella parvula Sp7g23570 K08736 - DNA mismatch repair protein MSH3 (MSH3) ch7-4 - View
Solanum pennellii Sopen03g004700 encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound insertion-deletion DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G). | homolog of DNA mismatch repair protein MSH3 (MSH3) | CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp , DNA mismatch repair protein MutS, connector , DNA mismatch repair protein MutS, N-terminal , DNA mismatch repair protein MutS, core , DNA mismatch repair protein MutS, C-terminal , DNA mismatch repair protein MutS-like, N-terminal | BEST Arabidopsis thaliana protein match is: MUTS homolog 6 Spenn-ch03 + View
Selenicereus undatus Hund11753 Scaffold_33679 + View
Trochodendron aralioides TAR636G0015 group1 + View
Theobroma cacao Thecc.03G175500 DNA mismatch repair protein MSH3 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104811986 DNA mismatch repair protein MSH3 isoform X1 NW_010965372.1 + View
Trifolium pratense TPR.G14330 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI23G0875 NC_052239.1 + View
Vaccinium macrocarpon vmacro06688 Similar to MSH3: DNA mismatch repair protein MSH3 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G3063 CM024071.1 + View
Vitis vinifera GSVIVG01010538001 chr16 - View