Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018010 hypothetical protein F383_16691 [Gossypium arboreum] Chr9 + View
CSS0041868 PREDICTED: protein SHI RELATED SEQUENCE 1-like [Nicotiana tomentosiformis] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G5760 LG-4 - View
Acer truncatum Atru.chr3.746 chr3 + View
Acer truncatum Atru.chr5.3106 chr5 - View
Acer truncatum Atru.chr13.368 chr13 + View
Actinidia chinensis Actinidia22499 Lachesis_group28 + View
Actinidia chinensis Actinidia29800 Lachesis_group27 + View
Actinidia chinensis Actinidia15382 Lachesis_group26 + View
Actinidia chinensis Actinidia00562 Lachesis_group12 + View
Actinidia chinensis Actinidia37982 Lachesis_group7 + View
Actinidia chinensis Actinidia26109 Lachesis_group25 - View
Arabidopsis lyrata AL7G14770 scaffold_7 + View
Arabidopsis lyrata AL1G32500 scaffold_1 - View
Arabidopsis lyrata AL2G35510 scaffold_2 - View
Arabidopsis lyrata AL4G10590 scaffold_4 + View
Avicennia marina MSTRG.25212 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.16834 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.1233 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.20057 ScioBoG_26180_HRSCAF_26306 - View
Avicennia marina MSTRG.24269 ScioBoG_4088_HRSCAF_4107 + View
Amaranthus hybridus Ah.05g172030 AmaHy_arrow1_Scaffold_5 + View
Aquilegia oxysepala Aqoxy6G02432 CHR06 + View
Aquilegia oxysepala Aqoxy5G01509 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y15ID5 PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F7N9UG PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R0GFR4 PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NWGY5G PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q8MHA7 PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T9K83P PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AAQ8XF PF05142 - Domain of unknown function (DUF702) (DUF702) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT1G19790 SHI-related sequence 7 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. SHI-related sequence 7 (SRS7)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1)%3B Has 184 Blast hits to 184 proteins in 22 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 8%3B Plants - 174%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). SHI-related sequence 7 (SRS7)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G75520 SHI-related sequence 5 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. SHI-related sequence 5 (SRS5)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2)%3B Has 299 Blast hits to 299 proteins in 34 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 11%3B Fungi - 2%3B Plants - 180%3B Viruses - 0%3B Other Eukaryotes - 104 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT4G36260 Lateral root primordium (LRP) protein-like protein A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. Encodes protein with a single zinc finger motif and a members of a small gene family of putative transcription factors in which the SHORT INTERNODES (SHI) gene is found. STY2/STY1 double mutants showed defective style%2C stigma as well as serrated leaves. STYLISH 2 (STY2)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: xylem and phloem pattern formation%2C style development%2C auxin homeostasis%2C negative regulation of gibberellic acid mediated signaling pathway%2C stigma development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 4 (TAIR:AT2G18120.1)%3B Has 2502 Blast hits to 2002 proteins in 224 species: Archae - 2%3B Bacteria - 961%3B Metazoa - 458%3B Fungi - 79%3B Plants - 348%3B Viruses - 38%3B Other Eukaryotes - 616 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT2G21400 SHI-related sequence3 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. SHI-related sequence3 (SRS3)%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1)%3B Has 181 Blast hits to 177 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 177%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC08g47033 ChrC08 - View
Brassica carinata BcaB03g14377 ChrB03 + View
Brassica carinata BcaC08g47344 ChrC08 + View
Brassica carinata BcaB02g07027 ChrB02 - View
Brassica carinata BcaC08g45570 ChrC08 + View
Brassica carinata BcaB05g24916 ChrB05 - View
Brassica carinata BcaB07g31993 ChrB07 - View
Brassica carinata BcaC03g15585 ChrC03 - View
Brassica carinata BcaB01g00550 ChrB01 - View
Brassica napus A04p16120 A04 + View
Brassica napus C06p49510 C06 - View
Brassica napus A02p19990 A02 - View
Brassica napus A06p15910 A06 - View
Brassica napus C05p18220 C05 - View
Brassica napus C02p32690 C02 - View
Brassica napus A07p41060 A07 - View
Brassica napus C06p32550 C06 + View
Brassica napus A07p28780 A07 + View
Brassica oleracea BolC6t39990H C6 - View
Brassica oleracea BolC2t09300H C2 - View
Brassica oleracea BolC6t38378H C6 + View
Brassica oleracea BolC5t30529H C5 - View
Brassica oleracea BolC7t42907H C7 + View
Brassica oleracea BolC8t50254H C8 + View
Brassica rapa BraA07t31643Z A07 - View
Brassica rapa BraA02t07038Z A02 - View
Brassica rapa BraA06t24702Z A06 - View
Brassica rapa BraA07t30519Z A07 + View
Beta vulgaris EL10Ac1g00566 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G358.17 PGAv.1.6.scaffold358 + View
Capsicum annuum CAN.G851.21 PGAv.1.6.scaffold851 + View
Cannabis sativa CANSAT25G3003 NC_044370.1 - View
Cannabis sativa CANSAT01G0495 NC_044373.1 + View
Cicer arietinum L. Ca_02064_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_13390_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_24881_v3 Ca_LG8_v3 + View
Corylus avellana Haze_03824 Similar to SHI: Protein SHORT INTERNODES (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_22577 Similar to SRS7: Protein SHI RELATED SEQUENCE 7 (Arabidopsis thaliana OX%3D3702) 3 - View
Corylus avellana Haze_02311 Similar to SRS3: Protein SHI RELATED SEQUENCE 3 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc07_g10250 Putative Lateral root primordium (LRP) protein-related chr7 - View
Coffea canephora Cc10_g02200 Putative SHI-related sequence 5 chr10 + View
Coffea canephora Cc02_g17110 Putative Lateral root primordium (LRP) protein-related chr2 + View
Citrus clementina Ciclev10025993m.g scaffold_7 - View
Citrus clementina Ciclev10001824m.g scaffold_5 - View
Carpinus fangiana Cfa005071 Cfa02 - View
Carpinus fangiana Cfa006925 Cfa02 - View
Carpinus fangiana Cfa013898 Cfa05 - View
Cardamine hirsuta CARHR068920 SHI-related sequence 5 Chr2 - View
Cardamine hirsuta CARHR020300 SHI-related sequence 7 Chr1 - View
Cardamine hirsuta CARHR244660 Lateral root primordium (LRP) protein-related Chr7 - View
Cardamine hirsuta CARHR112300 Lateral root primordium (LRP) protein-related Chr4 + View
Carya illinoinensis CiPaw.07G154800 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr07 + View
Carya illinoinensis CiPaw.06G131200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr06 + View
Carya illinoinensis CiPaw.05G071500 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr05 - View
Carya illinoinensis CiPaw.08G062200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr08 - View
Carya illinoinensis CiPaw.08G136600 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr08 + View
Citrullus lanatus ClCG08G014580 Lateral root primordium family protein CG_Chr08 + View
Citrullus lanatus ClCG05G018620 Lateral root primordium family protein CG_Chr05 + View
Citrullus lanatus ClCG01G020040 Lateral root primordium family protein CG_Chr01 - View
Cucumis melo MELO3C003781.2 Protein SHI RELATED SEQUENCE 1 chr04 + View
Cucumis melo MELO3C010984.2 Protein SHI RELATED SEQUENCE 1 chr03 + View
Cucumis melo MELO3C007877.2 Protein SHI RELATED SEQUENCE 1 chr08 - View
Carica papaya Cpa.g.sc150.46 supercontig_150 + View
Carica papaya Cpa.g.sc6.196 supercontig_6 + View
Chenopodium quinoa AUR62034552 SHI: Protein SHORT INTERNODES C_Quinoa_Scaffold_1522 - View
Chenopodium quinoa AUR62014445 SHI: Protein SHORT INTERNODES C_Quinoa_Scaffold_1566 + View
Chenopodium quinoa AUR62007636 SRS3: Protein SHI RELATED SEQUENCE 3 C_Quinoa_Scaffold_2646 - View
Chenopodium quinoa AUR62016794 SHI: Protein SHORT INTERNODES C_Quinoa_Scaffold_3670 - View
Capsella rubella Carub.0002s2238 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_2 - View
Capsella rubella Carub.0007s0398 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_7 + View
Capsella rubella Carub.0001s1932 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_1 - View
Capsella rubella Carub.0004s0045 PF05142 - Domain of unknown function (DUF702) (DUF702) scaffold_4 + View
Cucumis sativus L. CsaV3_2G029220 protein SHI RELATED SEQUENCE 1 chr2 - View
Cucumis sativus L. CsaV3_6G046800 protein SHI RELATED SEQUENCE 1 chr6 - View
Cucumis sativus L. CsaV3_3G045570 protein SHI RELATED SEQUENCE 1 chr3 - View
Daucus carota DCAR_017509 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_003652 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_009951 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_013845 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_017328 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_022448 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_025983 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv31805 GWHABJS00000002 - View
Davidia involucrata Dinv40041 GWHABJS00000014 + View
Davidia involucrata Dinv39479 GWHABJS00000011 - View
Davidia involucrata Dinv42019 GWHABJS00000002 - View
Davidia involucrata Dinv23477 GWHABJS00000005 + View
Durio zibethinus Duzib093G0081 NW_019167937.1 - View
Durio zibethinus Duzib116G0506 NW_019167949.1 + View
Durio zibethinus Duzib248G0091 NW_019168048.1 - View
Durio zibethinus Duzib052G0521 NW_019167849.1 - View
Durio zibethinus Duzib041G0759 NW_019167826.1 + View
Durio zibethinus Duzib187G0635 NW_019167860.1 + View
Erigeron canadensis ECA232G4901 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA246G2950 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G2385 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA247G3241 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.F01614 Chr06 - View
Eucalyptus grandis Eucgr.I01308 Chr09 - View
Eucalyptus grandis Eucgr.J02389 Chr10 - View
Erythranthe guttata Migut.N03122 scaffold_14 - View
Erythranthe guttata Migut.B00196 scaffold_2 - View
Eutrema salsugineum Thhalv10019655m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_9 + View
Eutrema salsugineum Thhalv10025845m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_1 + View
Eutrema salsugineum Thhalv10009634m.g PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED scaffold_5 + View
Fragaria x ananassa FAN20G2535 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-3 - View
Fragaria x ananassa FAN20G3044 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-3 + View
Fragaria x ananassa FAN15G0801 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-4 - View
Fragaria x ananassa FAN15G2603 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2-4 - View
Fragaria x ananassa FAN26G1640 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1-2 - View
Fragaria vesca FvH4_2g38950 PF05142 - Domain of unknown function (DUF702) (DUF702) Fvb2 + View
Fragaria vesca FvH4_1g12410 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Fvb1 - View
Gossypium hirsutum Gohir.A03G197800 PF05142 - Domain of unknown function (DUF702) (DUF702) A03 - View
Gossypium hirsutum Gohir.D02G097000 PF05142 - Domain of unknown function (DUF702) (DUF702) D02 - View
Gossypium hirsutum Gohir.D05G192000 PF05142 - Domain of unknown function (DUF702) (DUF702) D05 + View
Gossypium hirsutum Gohir.D06G002300 PF05142 - Domain of unknown function (DUF702) (DUF702) D06 + View
Gossypium hirsutum Gohir.A13G031350 PF05142 - Domain of unknown function (DUF702) (DUF702) A13 + View
Gossypium hirsutum Gohir.D03G011400 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED D03 - View
Gossypium hirsutum Gohir.A03G080500 PF05142 - Domain of unknown function (DUF702) (DUF702) A03 - View
Gossypium hirsutum Gohir.D01G099600 PF05142 - Domain of unknown function (DUF702) (DUF702) D01 - View
Gossypium hirsutum Gohir.D13G029350 PF05142 - Domain of unknown function (DUF702) (DUF702) D13 + View
Gossypium hirsutum Gohir.D11G186400 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED D11 - View
Gossypium hirsutum Gohir.A05G188900 PF05142 - Domain of unknown function (DUF702) (DUF702) A05 + View
Gossypium hirsutum Gohir.A06G006400 PF05142 - Domain of unknown function (DUF702) (DUF702) A06 + View
Gossypium hirsutum Gohir.A01G113350 PF05142 - Domain of unknown function (DUF702) (DUF702) A01 + View
Gossypium hirsutum Gohir.D02G209800 PF05142 - Domain of unknown function (DUF702) (DUF702) D02 - View
Glycine max Glyma.11G072500 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm11 + View
Glycine max Glyma.17G255000 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm17 - View
Glycine max Glyma.12G039100 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm12 + View
Glycine max Glyma.14G216400 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm14 - View
Glycine max Glyma.04G027400 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm04 + View
Glycine max Glyma.06G027500 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm06 + View
Glycine max Glyma.16G132100 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Gm16 - View
Glycine max Glyma.11G113200 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm11 + View
Glycine max Glyma.06G009200 PF05142 - Domain of unknown function (DUF702) (DUF702) Gm06 + View
Gossypium raimondii Gorai.002G125600 Chr02 + View
Gossypium raimondii Gorai.010G006800 Chr10 + View
Gossypium raimondii Gorai.013G033500 Chr13 + View
Gossypium raimondii Gorai.009G197300 Chr09 + View
Gossypium raimondii Gorai.005G110600 Chr05 - View
Gossypium raimondii Gorai.007G198100 Chr07 - View
Gossypium raimondii Gorai.005G247100 Chr05 - View
Hydrangea macrophylla Hma1.2p1_1386F.1_g279860 Hma1.2p1_1386F.1 + View
Hydrangea macrophylla Hma1.2p1_0773F.1_g216100 Hma1.2p1_0773F.1 - View
Hydrangea macrophylla Hma1.2p1_0066F.1_g035950 Hma1.2p1_0066F.1 + View
Lupinus albus Lalb_Chr24g0398801 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr24 + View
Lupinus albus Lalb_Chr22g0354481 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr22 + View
Lupinus albus Lalb_Chr14g0369671 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr14 - View
Lupinus albus Lalb_Chr11g0062101 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr11 + View
Lupinus albus Lalb_Chr23g0266341 PF05142 - Domain of unknown function (DUF702) (DUF702) Lalb_Chr23 + View
Lotus japonicus Lj3g0013386 PF05142 - Domain of unknown function (DUF702) (DUF702) chr3 + View
Lotus japonicus Lj5g0027236 PF05142 - Domain of unknown function (DUF702) (DUF702) chr5 + View
Lotus japonicus Lj1g0023817 PF05142 - Domain of unknown function (DUF702) (DUF702) chr1 + View
Lonicera japonica Lj4C212T5 GWHAAZE00000004 - View
Lonicera japonica Lj5P192T30 GWHAAZE00000005 + View
Lonicera japonica Lj4A790T64 GWHAAZE00000004 - View
Lonicera japonica Lj2A461T35 GWHAAZE00000002 - View
Lonicera japonica Lj4A30T28 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_1_16440 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_5_120141 Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_5_26401 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Lsat_1_v8_lg_5 + View
Malus domestica MD02G1137000 Lateral root primordium (LRP) protein-related Chr02 + View
Malus domestica MD05G1058700 Lateral root primordium (LRP) protein-related Chr05 + View
Malus domestica MD08G1021500 SHI-related sequence 7 Chr08 - View
Malus domestica MD10G1066400 Lateral root primordium (LRP) protein-related Chr10 + View
Malus domestica MD15G1019200 SHI-related sequence 7 Chr15 - View
Malus domestica MD15G1250700 Lateral root primordium (LRP) protein-related Chr15 + View
Manihot esculenta Manes.05G153200 Chromosome05 + View
Manihot esculenta Manes.11G087500 Chromosome11 - View
Manihot esculenta Manes.02G100100 Chromosome02 + View
Manihot esculenta Manes.04G085450 Chromosome04 + View
Manihot esculenta Manes.18G018200 Chromosome18 + View
Medicago truncatula Medtr4g071110 zinc finger, LRP1 type protein chr4 - View
Medicago truncatula Medtr1g023230 zinc finger, LRP1 type protein chr1 - View
Medicago truncatula Medtr3g112510 transcription factor, putative chr3 - View
Nicotiana tabacum Nitab4.5_0000136g0130 Lateral Root Primordium type 1, C-terminal, Zinc finger, lateral root primordium type 1, Protein of unknown function DUF702 Nitab4.5_0000136 + View
Nicotiana tabacum Nitab4.5_0001840g0110 Lateral Root Primordium type 1, C-terminal, Protein of unknown function DUF702 Nitab4.5_0001840 - View
Olea europaea Oeu030401.1 chr14 + View
Petunia axillaris Peaxi162Scf00010g00077 SHI-related sequence 4 Peaxi162Scf00010 + View
Petunia axillaris Peaxi162Scf00016g00232 Lateral root primordium (LRP) protein-related Peaxi162Scf00016 + View
Punica granatum PGR031G1427 NC_045127.1 + View
Punica granatum PGR119G2466 NC_045132.1 + View
Punica granatum PGR102G0489 NC_045129.1 + View
Punica granatum PGR142G0796 NC_045128.1 + View
Punica granatum PGR083G1590 NC_045133.1 + View
Prunus persica Prupe.7G163600 PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Pp07 - View
Prunus persica Prupe.1G371500 PF05142 - Domain of unknown function (DUF702) (DUF702) Pp01 - View
Pisum sativum Psat2g157000 Domain of unknown function (DUF702) chr2LG1 - View
Pisum sativum Psat6g005600 Domain of unknown function (DUF702) chr6LG2 + View
Pisum sativum Psat5g014640 Domain of unknown function (DUF702) chr5LG3 + View
Papaver somniferum PSO541G2701 NC_039363.1 - View
Papaver somniferum PSO675G4425 NC_039358.1 - View
Populus trichocarpa Potri.005G118200 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED Chr05 - View
Populus trichocarpa Potri.005G234200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr05 - View
Populus trichocarpa Potri.009G121600 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr09 - View
Populus trichocarpa Potri.004G160600 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr04 - View
Populus trichocarpa Potri.002G028500 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr02 + View
Phaseolus vulgaris Phvul.009G004300 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr09 + View
Phaseolus vulgaris Phvul.009G013700 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr09 - View
Phaseolus vulgaris Phvul.011G041200 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr11 + View
Phaseolus vulgaris Phvul.001G009800 PF05142 - Domain of unknown function (DUF702) (DUF702) Chr01 + View
Quercus lobata QL02p010571 CM012294 - View
Quercus lobata QL06p034582 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0100271 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr6g0302041 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim07G0244300 chr07 - View
Rhododendron simsii Rhsim08G0124000 chr08 - View
Striga asiatica SGA_v2.0_scaffold326G48743 scaffold326 - View
Striga asiatica SGA_v2.0_scaffold162G37920 scaffold162 - View
Striga asiatica SGA_v2.0_scaffold11G05857 scaffold11 - View
Striga asiatica SGA_v2.0_scaffold58G20486 scaffold58 - View
Striga asiatica SGA_v2.0_scaffold201G41325 scaffold201 + View
Salvia bowleyana SalBow8G3865 GWHASIU00000004 + View
Salvia bowleyana SalBow8G3048 GWHASIU00000004 - View
Salvia bowleyana SalBow7G3053 GWHASIU00000005 - View
Salvia bowleyana SalBow3G3200 GWHASIU00000006 - View
Salix brachista Sabra04G0107400 GWHAAZH00000004 - View
Salix brachista Sabra09G0093900 GWHAAZH00000009 - View
Salix brachista Sabra02G0022600 GWHAAZH00000002 + View
Salix brachista Sabra05G0180500 GWHAAZH00000005 - View
Simmondsia chinensis Sc15g0007240 GWHAASQ00000015 - View
Simmondsia chinensis Sc03g0003310 GWHAASQ00000003 - View
Simmondsia chinensis Sc26g0003290 GWHAASQ00000026 + View
Simmondsia chinensis Sc08g0000750 GWHAASQ00000008 + View
Sechium edule Sed0009988 LG01 + View
Sechium edule Sed0011373 LG11 - View
Sechium edule Sed0001560 LG03 + View
Sechium edule Sed0012125 LG14 - View
Sapria himalayana SHI08593 scaffold7_18583372 + View
Sapria himalayana SHI08111 scaffold7_18583372 + View
Solanum lycopersicum Solyc02g084680.3 Protein SHI RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2G3AAR0_CAPAN),Pfam:PF05142 SL4.0ch02 + View
Solanum lycopersicum Solyc04g080970.4 Protein SHI RELATED SEQUENCE 1 (AHRD V3.3 *** A0A2G3CQY9_CAPCH) SL4.0ch04 - View
Solanum lycopersicum Solyc02g062400.3 Expression of terpenoids 1 (AHRD V3.3 *** K4B6C9_SOLLC) SL4.0ch02 + View
Schrenkiella parvula Sp7g34000 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED ch7-6 - View
Schrenkiella parvula Sp4g00580 PF05142 - Domain of unknown function (DUF702) (DUF702) ch4-1 + View
Schrenkiella parvula Sp5g30650 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED ch5-7 - View
Schrenkiella parvula Sp1g17600 PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED ch1-1 - View
Solanum pennellii Sopen02g029350 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch02 + View
Solanum pennellii Sopen01g052300 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. | SHI-related sequence 5 (SRS5) | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 Spenn-ch01 - View
Solanum pennellii Sopen02g013400 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch02 + View
Solanum pennellii Sopen04g034580 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) | STYLISH 1 (STY1) | FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: nucleus | EXPRESSED IN: 6 plant structures | CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal , Zinc finger, Lateral Root Primordium type 1 , Protein of unknown function DUF702 | BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400003761 DNA-binding protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400030969 Transcription factor ST4.03ch01 - View
Selenicereus undatus Hund17210 Scaffold_33675 - View
Selenicereus undatus Hund16466 Scaffold_33677 - View
Selenicereus undatus Hund26875 Scaffold_2055 + View
Selenicereus undatus Hund14018 Scaffold_33679 - View
Selenicereus undatus Hund00231 Scaffold_33678 + View
Trochodendron aralioides TAR625G1372 group4 + View
Trochodendron aralioides TAR381G1719 group11 + View
Trochodendron aralioides TAR628G0913 group5 - View
Trochodendron aralioides TAR376G0411 group14 - View
Theobroma cacao Thecc.01G025100 Lateral root primordium protein-related Chromosome_1 - View
Theobroma cacao Thecc.02G078600 Lateral root primordium protein-related Chromosome_2 + View
Theobroma cacao Thecc.08G036500 SHI-related sequence 7 Chromosome_8 - View
Tarenaya hassleriana THA.LOC104821312 protein SHI RELATED SEQUENCE 1-like NW_010966459.1 + View
Tarenaya hassleriana THA.LOC104813807 protein SHI RELATED SEQUENCE 5 NW_010965373.1 + View
Tarenaya hassleriana THA.LOC104811401 protein SHI RELATED SEQUENCE 5 NW_010965372.1 + View
Trifolium pratense TPR.G30480 Tp57577_TGAC_v2_LG1 - View
Trifolium pratense TPR.G12366 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI53G1955 NC_052244.1 - View
Tripterygium wilfordii TWI75G1059 NC_052253.1 + View
Tripterygium wilfordii TWI36G0504 NC_052237.1 - View
Tripterygium wilfordii TWI56G1419 NC_052242.1 - View
Vaccinium macrocarpon vmacro17446 Similar to SRS1: Protein SHI RELATED SEQUENCE 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro04319 Similar to EOT1: Protein EXPRESSION OF TERPENOIDS 1 (Solanum lycopersicum OX%3D4081) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0812 CM024072.1 - View
Vigna mungo VMungo1309G1130 CM024072.1 - View
Vigna mungo VMungo0647G0839 CM024073.1 + View
Vitis vinifera GSVIVG01018845001 chr4 - View
Vitis vinifera GSVIVG01009812001 chr18 - View