Gene: AT4G36260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G36260
  • Transcript Identifier AT4G36260.1
  • Gene Type Coding gene
  • Location Chr4 : 17155705-17157006 : negative

Gene Family Information

  • ID HOM05D000711
  • #Genes/#Species 809/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G36260.1
  • symbol STY2
  • Alias SRS2,SHI RELATED SEQUENCE 2
  • full_name STYLISH 2
  • uniprot O65517

Descriptions

  • Description Lateral root primordium (LRP) protein-like protein
  • Computational description STYLISH 2 (STY2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, style development, auxin homeostasis, negative regulation of gibberellic acid mediated signaling pathway, stigma development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 4 (TAIR:AT2G18120.1); Has 2502 Blast hits to 2002 proteins in 224 species: Archae - 2; Bacteria - 961; Metazoa - 458; Fungi - 79; Plants - 348; Viruses - 38; Other Eukaryotes - 616 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
IGI
Gene Ontologypollen development1
GO:0009851
IEA
GOA Databaseauxin biosynthetic process
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0045893
IBA
Gene Ontologypositive regulation of transcription, DNA-templated2
GO:0048653
IGI
Gene Ontologyanther development1
GO:0010252
IGI
Gene Ontologyauxin homeostasis3
GO:0048480
IGI
Gene Ontologystigma development4
GO:0048479
IGI
Gene Ontologystyle development4
GO:0010051
IGI
Gene Ontologyxylem and phloem pattern formation4
GO:0009938
NAS
Gene Ontologynegative regulation of gibberellic acid mediated signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IBA
Gene OntologyDNA binding2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003700
NAS
Gene OntologyDNA-binding transcription factor activity
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISS, ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006510 Zinc finger, lateral root primordium type 1
IPR007818 SHI protein family
IPR006511 SHORT INTERNODES, C-terminal
Mapman id Description
15.5.45 RNA biosynthesis.transcriptional regulation.transcription factor (SRS)