Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001171 hypothetical protein CICLE_v10033386mg, partial [Citrus clementina] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G23870 LG-1 - View
Aethionema arabicum Aa31LG10G12340 LG-10 - View
Acer truncatum Atru.chr1.1069 chr1 + View
Actinidia chinensis Actinidia19399 Lachesis_group0 + View
Actinidia chinensis Actinidia09343 Lachesis_group5 - View
Arabidopsis lyrata AL4G40180 scaffold_4 - View
Arabidopsis lyrata AL5G39090 scaffold_5 - View
Avicennia marina MSTRG.10822 ScioBoG_13798_HRSCAF_13862 - View
Amaranthus hybridus Ah.13g076390 AmaHy_arrow1_Scaffold_13 + View
Amaranthus hybridus Ah.04g151650 AmaHy_arrow1_Scaffold_4 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DQ30B7 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EYRY5F PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT2G41850 polygalacturonase ADPG2-like protein ADPG2. polygalacturonase abscission zone A. thaliana (PGAZAT)%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: cell wall modification involved in abscission%2C fruit dehiscence%2C floral organ abscission%2C anther dehiscence%2C carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1)%3B Has 4465 Blast hits to 4447 proteins in 569 species: Archae - 8%3B Bacteria - 1510%3B Metazoa - 14%3B Fungi - 1290%3B Plants - 1500%3B Viruses - 5%3B Other Eukaryotes - 138 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G57510 Pectin lyase-like superfamily protein Encodes ADPG1%2C a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set%2C indehiscent fruit and reduced pollen shedding. ADPG1%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: cell wall modification involved in abscission%2C fruit dehiscence%2C anther dehiscence%2C carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: polygalacturonase abscission zone A. thaliana (TAIR:AT2G41850.1)%3B Has 4405 Blast hits to 4383 proteins in 555 species: Archae - 8%3B Bacteria - 1458%3B Metazoa - 14%3B Fungi - 1288%3B Plants - 1499%3B Viruses - 2%3B Other Eukaryotes - 136 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC02g09942 ChrC02 - View
Brassica carinata BcaB02g08313 ChrB02 + View
Brassica carinata BcaB02g07598 ChrB02 + View
Brassica carinata BcaC08g44850 ChrC08 - View
Brassica carinata BcaC07g40374 ChrC07 + View
Brassica carinata BcaB06g29208 ChrB06 - View
Brassica carinata BcaC02g07291 ChrC02 + View
Brassica carinata BcaC02g12487 ChrC02 + View
Brassica napus C08p33040 C08 - View
Brassica napus A07p23460 A07 - View
Brassica napus C06p24570 C06 - View
Brassica napus A09p50370 A09 - View
Brassica napus A05p02590 A05 - View
Brassica napus C04p69240 C04 - View
Brassica napus C04p34910 C04 + View
Brassica napus A04p31830 A04 - View
Brassica napus C04p03040 C04 - View
Brassica oleracea BolC8t50904H C8 - View
Brassica oleracea BolC4t28424H C4 - View
Brassica oleracea BolC4t21946H C4 - View
Brassica oleracea BolC6t37605H C6 - View
Brassica oleracea BolC4t25045H C4 + View
Brassica rapa BraA09t40489Z A09 - View
Brassica rapa BraA05t19252Z A05 - View
Brassica rapa BraA07t30008Z A07 - View
Brassica rapa BraA04t18641Z A04 - View
Beta vulgaris EL10Ac3g07071 PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Chr3_EL10_PGA_scaffold7 + View
Beta vulgaris EL10Ac2g04337 PTHR31375:SF28 - POLYGALACTURONASE QRT2 Chr2_EL10_PGA_scaffold6 + View
Capsicum annuum CAN.G128.13 PGAv.1.6.scaffold128 - View
Cannabis sativa CANSAT80G0343 NC_044372.1 - View
Cicer arietinum L. Ca_08468_v3 Ca_LG3_v3 - View
Corylus avellana Haze_19877 Similar to Polygalacturonase (Actinidia deliciosa OX%3D3627) 10 - View
Coffea canephora Cc06_g16810 Polygalacturonase chr6 - View
Citrus clementina Ciclev10033386m.g scaffold_4 - View
Citrus clementina Ciclev10005317m.g scaffold_9 - View
Carpinus fangiana Cfa010773 Cfa04 + View
Carpinus fangiana Cfa016836 Cfa07 - View
Cardamine hirsuta CARHR167720 Polygalacturonase Chr5 - View
Cardamine hirsuta CARHR136940 Polygalacturonase Chr4 - View
Carya illinoinensis CiPaw.10G032400 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Chr10 + View
Carya illinoinensis CiPaw.09G036800 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Chr09 + View
Carya illinoinensis CiPaw.13G005600 PTHR31375:SF28 - POLYGALACTURONASE QRT2 Chr13 + View
Citrullus lanatus ClCG09G004100 Polygalacturonase (Precursor) CG_Chr09 - View
Cucumis melo MELO3C023170.2 polygalacturonase-like chr08 - View
Cucumis melo MELO3C014583.2 exopolygalacturonase-like chr05 - View
Cucumis melo MELO3C023980.2 polygalacturonase-like chr04 - View
Cucumis melo MELO3C023556.2 Polygalacturonase chr01 - View
Carica papaya Cpa.g.sc92.36 supercontig_92 + View
Capsella rubella Carub.0005s2435 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED scaffold_5 - View
Capsella rubella Carub.0004s2415 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_3G032100 polygalacturonase-like chr3 - View
Daucus carota DCAR_013595 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_016984 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv39587 GWHABJS00000015 - View
Davidia involucrata Dinv01267 GWHABJS00000021 - View
Davidia involucrata Dinv43437 GWHABJS00000016 - View
Durio zibethinus Duzib138G0713 NW_019167893.1 + View
Durio zibethinus Duzib128G0206 NW_019168481.1 - View
Durio zibethinus Duzib093G0148 NW_019167937.1 - View
Erigeron canadensis ECA236G2260 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA248G0695 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.A02373 Chr01 - View
Eucalyptus grandis Eucgr.G03373 Chr07 - View
Erythranthe guttata Migut.K00081 scaffold_11 + View
Eutrema salsugineum Thhalv10016680m.g PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED scaffold_10 - View
Eutrema salsugineum Thhalv10005982m.g PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED scaffold_19 + View
Fragaria x ananassa FAN06G2512 PTHR31375//PTHR31375:SF28 - FAMILY NOT NAMED // POLYGALACTURONASE QRT2 Fvb7-2 + View
Fragaria x ananassa FAN03G2356 PTHR31375//PTHR31375:SF28 - FAMILY NOT NAMED // POLYGALACTURONASE QRT2 Fvb7-3 - View
Fragaria vesca FvH4_7g01140 PTHR31375//PTHR31375:SF28 - FAMILY NOT NAMED // POLYGALACTURONASE QRT2 Fvb7 + View
Fragaria vesca FvH4_6g23580 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D09G120200 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED D09 - View
Gossypium hirsutum Gohir.A09G123201 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED A09 - View
Glycine max Glyma.15G275400 PTHR31375//PTHR31375:SF28 - FAMILY NOT NAMED // POLYGALACTURONASE QRT2 Gm15 - View
Glycine max Glyma.19G140600 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Gm19 - View
Glycine max Glyma.03G137700 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Gm03 - View
Glycine max Glyma.02G183000 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Gm02 + View
Gossypium raimondii Gorai.006G137600 Chr06 - View
Helianthus annuus HanXRQChr05g0131951 Putative pectin lyase fold/virulence factor; Pectate lyase superfamily protein HanXRQChr05 - View
Lupinus albus Lalb_Chr01g0017441 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Lalb_Chr01 - View
Lupinus albus Lalb_Chr21g0316441 PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Lalb_Chr21 + View
Lotus japonicus Lj5g0013693 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED chr5 - View
Lotus japonicus Lj3g0022833 PTHR31375//PTHR31375:SF28 - FAMILY NOT NAMED // POLYGALACTURONASE QRT2 chr3 + View
Lotus japonicus Lj1g0022525 PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED chr1 + View
Lonicera japonica Lj2C381G5 GWHAAZE00000002 + View
Lonicera japonica Lj7A572G27 GWHAAZE00000007 + View
Lonicera japonica Lju124A38T28 GWHAAZE00000021 + View
Lactuca sativa Lsat_1_v5_gn_8_79521 PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Lsat_1_v8_lg_8 + View
Malus domestica MD02G1309400 Pectin lyase-like superfamily protein Chr02 - View
Malus domestica MD07G1011600 Pectin lyase-like superfamily protein Chr07 + View
Manihot esculenta Manes.08G049800 Chromosome08 + View
Manihot esculenta Manes.09G024100 Chromosome09 - View
Medicago truncatula Medtr7g091840 endo polygalacturonase chr7 - View
Nelumbo nucifera Nn7g36233 chr7 + View
Olea europaea Oeu000822.2 chr17 + View
Olea europaea Oeu008141.1 chr2 + View
Olea europaea Oeu012202.1 chr17 + View
Oryza sativa ssp. japonica Os07g0207800 Similar to PGAZAT (POLYGALACTURONASE ABSCISSION ZONE A. THALIANA); polygalacturonase. chr07 - View
Petunia axillaris Peaxi162Scf00493g00319 Pectin lyase-like superfamily protein Peaxi162Scf00493 - View
Punica granatum PGR004G2162 NC_045131.1 + View
Prunus persica Prupe.2G014800 PTHR31375:SF28 - POLYGALACTURONASE QRT2 Pp02 + View
Prunus persica Prupe.7G063900 PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Pp07 - View
Pisum sativum Psat3g072200 Glycosyl hydrolases family 28 chr3LG5 + View
Populus trichocarpa Potri.006G052700 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Chr06 - View
Populus trichocarpa Potri.016G054800 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Chr16 + View
Phaseolus vulgaris Phvul.007G253101 PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Chr07 - View
Phaseolus vulgaris Phvul.001G135100 Chr01 - View
Phaseolus vulgaris Phvul.005G022500 PTHR31375:SF28 - POLYGALACTURONASE QRT2 Chr05 + View
Quercus lobata QL07p020856 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0481551 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0018900 chr03 + View
Striga asiatica SGA_v2.0_scaffold105G30421 scaffold105 - View
Striga asiatica SGA_v2.0_scaffold94G28469 scaffold94 + View
Salvia bowleyana SalBow6G2681 GWHASIU00000002 + View
Salvia bowleyana SalBow1G6328 GWHASIU00000001 + View
Salix brachista Sabra06G0037100 GWHAAZH00000006 - View
Salix brachista Sabra09G0044500 GWHAAZH00000009 - View
Simmondsia chinensis Sc19g0006760 GWHAASQ00000019 + View
Simmondsia chinensis Sc11g0009140 GWHAASQ00000011 - View
Solanum lycopersicum Solyc01g087280.2 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LRJ2_ARTAN) SL4.0ch01 + View
Solanum lycopersicum Solyc04g015530.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LRJ2_ARTAN) SL4.0ch04 + View
Solanum lycopersicum Solyc10g080210.2 polygalacturonase SL4.0ch10 - View
Schrenkiella parvula Sp5g05090 PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED ch5-1 + View
Schrenkiella parvula Sp4g24120 PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED ch4-6 - View
Solanum pennellii Sopen10g030820 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao), Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. | QUARTET 2 (QRT2) | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: in 6 processes | LOCATED IN: endomembrane system | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch10 - View
Solanum pennellii Sopen04g007600 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao), Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. | ADPG1 | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, anther dehiscence, carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: polygalacturonase abscission zone A. thaliana Spenn-ch04 + View
Solanum pennellii Sopen01g034320 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao), ADPG2. | polygalacturonase abscission zone A. thaliana (PGAZAT) | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, floral organ abscission, anther dehiscence, carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 6 plant structures | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400027239 Dehiscence polygalacturonase ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400006862 Polygalacturonase ST4.03ch01 - View
Trochodendron aralioides TAR633G2646 group2 + View
Trochodendron aralioides TAR623G0636 group7 + View
Theobroma cacao Thecc.05G158200 Polygalacturonase abscission zone A Chromosome_5 - View
Tarenaya hassleriana THA.LOC104824449 polygalacturonase ADPG2-like NW_010966881.1 - View
Tarenaya hassleriana THA.LOC104802159 polygalacturonase ADPG2-like NW_010960188.1 - View
Trifolium pratense TPR.G3738 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI74G0638 NC_052234.1 + View
Vaccinium macrocarpon vmacro22360 Similar to Polygalacturonase (Actinidia deliciosa OX%3D3627) scaffold00342_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13672 Similar to Polygalacturonase (Actinidia deliciosa OX%3D3627) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G3729 CM024070.1 - View
Vigna mungo VMungo1080G0125 CM024079.1 - View
Vitis vinifera GSVIVG01033303001 chr8 + View
Vitis vinifera GSVIVG01032118001 chr13 - View