Gene: Sopen10g030820
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g030820
- Transcript Identifier Sopen10g030820.1
- Gene Type Coding gene
- Location Spenn-ch10 : 78417755-78423904 : negative
Gene Family Information
- ID HOM05D000037
- #Genes/#Species 5045/97
- Phylogenetic origin
- ID ORTHO05D000648
- #Genes/#Species 711/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g030820.1
Descriptions
- Description Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao), Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. | QUARTET 2 (QRT2) | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: in 6 processes | LOCATED IN: endomembrane system | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
GO:0045490 | ISO | PLAZA Integrative Orthology | pectin catabolic process | AT3G07970 |
GO:0048235 | ISO | PLAZA Integrative Orthology | pollen sperm cell differentiation | AT3G07970 |
GO:0009830 | ISO | PLAZA Integrative Orthology | cell wall modification involved in abscission | AT3G07970 |
GO:0010227 | ISO | PLAZA Integrative Orthology | floral organ abscission | AT2G41850 |
GO:0009901 | ISO | PLAZA Integrative Orthology | anther dehiscence | AT3G07970 |
GO:0010047 | ISO | PLAZA Integrative Orthology | fruit dehiscence | AT3G07970 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004650 | IEA | InterPro | polygalacturonase activity |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
21.3.5.1.1 | Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2) |