Gene: AT3G57510

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G57510
  • Transcript Identifier AT3G57510.1
  • Gene Type Coding gene
  • Location Chr3 : 21283546-21285842 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G57510.1
  • symbol ADPG1
  • uniprot O23147

Descriptions

  • Description Pectin lyase-like superfamily protein
  • Computational description ADPG1; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, anther dehiscence, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: polygalacturonase abscission zone A. thaliana (TAIR:AT2G41850.1); Has 4405 Blast hits to 4383 proteins in 555 species: Archae - 8; Bacteria - 1458; Metazoa - 14; Fungi - 1288; Plants - 1499; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0071555
IEA
GOA Databasecell wall organization
GO:0009901
IMP
IBA
Gene Ontologyanther dehiscence1 2
GO:0045490
IBA
Gene Ontologypectin catabolic process2
GO:0010047
IMP
IBA
Gene Ontologyfruit dehiscence1 2
GO:0009830
TAS
Gene Ontologycell wall modification involved in abscission1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
GOA Databasepolygalacturonase activity
GO:0004650
IDA
Gene Ontologypolygalacturonase activity1
GO:0004650
IEA
InterPropolygalacturonase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012334 Pectin lyase fold
IPR000743 Glycoside hydrolase, family 28
IPR011050 Pectin lyase fold/virulence factor
IPR006626 Parallel beta-helix repeat
Mapman id Description
21.3.5.1.1 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2)