Gene: Solyc10g080210.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g080210.2
  • Transcript Identifier Solyc10g080210.2.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 60670993-60676592 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g080210.2.1
  • uniprot P05117
  • gene_id Solyc10g080210

Descriptions

  • Description polygalacturonase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010227
ISO
PLAZA Integrative Orthologyfloral organ abscission AT2G41850
GO:0009830
ISO
PLAZA Integrative Orthologycell wall modification involved in abscission AT3G07970
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT3G07970
GO:0010047
IBA
GOA Databasefruit dehiscence
GO:0009901
IBA
GOA Databaseanther dehiscence
GO:0045490
IBA
GOA Databasepectin catabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0009835
IEA
GOA Databasefruit ripening
GO:0008152
IEA
GOA Databasemetabolic process
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
GOA Databasepolygalacturonase activity
GO:0004650
IEA
InterPropolygalacturonase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005618
IEA
GOA Databasecell wall
GO:0048046
IEA
GOA Databaseapoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000743 Glycoside hydrolase, family 28
IPR006626 Parallel beta-helix repeat
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
21.3.5.1.1 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2)