Gene: AL5G39090

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL5G39090
  • Transcript Identifier AL5G39090.t1
  • Gene Type Coding gene
  • Location scaffold_5 : 18440548-18442965 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL5G39090.v2.1
  • synonym fgenesh2_kg.5__2189__AT3G57510.1
  • synonym 486197
  • pacid 35918971

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0009830
ISO
PLAZA Integrative Orthologycell wall modification involved in abscission AT3G57510
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence AT3G57510
GO:0010047
ISO
PLAZA Integrative Orthologyfruit dehiscence AT3G57510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000743 Glycoside hydrolase, family 28
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
IPR006626 Parallel beta-helix repeat
Mapman id Description
21.3.5.1.1 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2)