Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018826 PREDICTED: transcription initiation factor IIB-2-like [Solanum lycopersicum] Chr13 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.1139 chr1 + View
Actinidia chinensis Actinidia39209 Lachesis_group18 - View
Arabidopsis lyrata AL4G39730 scaffold_4 - View
Avicennia marina MSTRG.26127 ScioBoG_52287_HRSCAF_52434 + View
Avicennia marina MSTRG.6415 ScioBoG_102839_HRSCAF_103093 - View
Amaranthus hybridus Ah.13g076530 Transcription initiation factor IIB-2 (General transcription factor TFIIB-2) (AtTFIIB2) AmaHy_arrow1_Scaffold_13 + View
Amaranthus hybridus Ah.04g151540 AmaHy_arrow1_Scaffold_4 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TYVF6X PTHR11618//PTHR11618:SF27 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // CYCLIN FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H5KDYL PTHR11618//PTHR11618:SF27 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // CYCLIN FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT2G41630 transcription factor IIB Encodes a transcription factor%2C TFIIB1%2C that plays important roles in pollen tube growth%2C guidance%2C and reception as well as endosperm development and is partially functionally different from AtTFIIB2 and AtTFIIB3/AtpBRP2. transcription factor IIB (TFIIB)%3B FUNCTIONS IN: RNA polymerase II transcription factor activity%2C transcription regulator activity%2C zinc ion binding%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%2C regulation of transcription%2C DNA-dependent%2C transcription initiation%2C regulation of transcription%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812)%2C Cyclin-like (InterPro:IPR011028)%2C Transcription factor TFIIB%2C cyclin-related (InterPro:IPR013150)%2C Zinc finger%2C TFIIB-type (InterPro:IPR013137)%2C Cyclin-related (InterPro:IPR013763)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1)%3B Has 1967 Blast hits to 1965 proteins in 361 species: Archae - 538%3B Bacteria - 1%3B Metazoa - 305%3B Fungi - 294%3B Plants - 195%3B Viruses - 14%3B Other Eukaryotes - 620 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G57370 Cyclin family protein Cyclin family protein%3B FUNCTIONS IN: RNA polymerase II transcription factor activity%2C transcription regulator activity%2C zinc ion binding%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%2C regulation of transcription%2C DNA-dependent%2C transcription initiation%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: M germinated pollen stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812)%2C Transcription factor TFIIB%2C cyclin-related (InterPro:IPR013150)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin-related (InterPro:IPR013763)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1)%3B Has 1320 Blast hits to 1319 proteins in 324 species: Archae - 441%3B Bacteria - 0%3B Metazoa - 207%3B Fungi - 261%3B Plants - 140%3B Viruses - 3%3B Other Eukaryotes - 268 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC01g05328 ChrC01 + View
Brassica carinata BcaC02g09931 ChrC02 - View
Brassica napus A03p23330 A03 - View
Brassica napus A06p39890 A06 + View
Brassica napus C03p27860 C03 - View
Brassica napus A05p02370 A05 - View
Brassica napus C04p02810 C04 - View
Brassica napus C04p35060 C04 + View
Brassica oleracea BolC3t15156H C3 - View
Brassica oleracea BolC4t21921H C4 - View
Brassica rapa BraA05t19231Z A05 - View
Brassica rapa BraA04t16039Z A04 + View
Brassica rapa BraA03t11551Z A03 - View
Beta vulgaris EL10Ac3g07112 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr3_EL10_PGA_scaffold7 + View
Capsicum annuum CAN.G641.22 PGAv.1.6.scaffold641 + View
Cicer arietinum L. Ca_08438_v3 Ca_LG3_v3 - View
Corylus avellana Haze_19819 Similar to TFIIB1: Transcription initiation factor IIB (Glycine max OX%3D3847) 10 - View
Coffea canephora Cc06_g17750 Transcription initiation factor IIB-2 chr6 + View
Citrus clementina Ciclev10005479m.g scaffold_9 - View
Carpinus fangiana Cfa016793 Cfa07 - View
Cardamine hirsuta CARHR136720 Transcription initiation factor IIB-2 Chr4 - View
Carya illinoinensis CiPaw.13G155000 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr13 - View
Carya illinoinensis CiPaw.09G039600 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr09 + View
Carya illinoinensis CiPaw.10G034500 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr10 + View
Citrullus lanatus ClCG04G003560 Transcription initiation factor iib, putative CG_Chr04 + View
Carica papaya Cpa.g.sc182.4 supercontig_182 + View
Chenopodium quinoa AUR62026065 TFIIB2: Transcription initiation factor IIB-2 C_Quinoa_Scaffold_3792 + View
Chenopodium quinoa AUR62024476 TFIIB2: Transcription initiation factor IIB-2 C_Quinoa_Scaffold_2876 + View
Capsella rubella Carub.0004s2388 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) scaffold_4 - View
Davidia involucrata Dinv12405 GWHABJS00000021 - View
Davidia involucrata Dinv39630 GWHABJS00000015 + View
Durio zibethinus Duzib106G0070 NW_019168492.1 - View
Durio zibethinus Duzib093G2008 NW_019167937.1 - View
Durio zibethinus Duzib128G1003 NW_019168481.1 - View
Erigeron canadensis ECA248G0012 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA236G3885 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.A02331 Chr01 - View
Erythranthe guttata Migut.K00095 scaffold_11 + View
Erythranthe guttata Migut.J01739 scaffold_10 - View
Eutrema salsugineum Thhalv10016972m.g K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) scaffold_10 - View
Fragaria x ananassa FAN14G4826 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Fvb6-1 - View
Fragaria x ananassa FAN05G4302 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Fvb6-3 - View
Fragaria x ananassa FAN02G0588 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Fvb6-4 + View
Fragaria x ananassa FAN09G0619 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Fvb6-2 - View
Gossypium hirsutum Gohir.D01G119900 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) D01 - View
Glycine max Glyma.19G136800 PTHR11618//PTHR11618:SF27 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // CYCLIN FAMILY PROTEIN-RELATED Gm19 - View
Glycine max Glyma.10G108600 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Gm10 - View
Glycine max Glyma.03G134600 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Gm03 - View
Glycine max Glyma.02G185900 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Gm02 + View
Gossypium raimondii Gorai.002G146300 Chr02 - View
Lupinus albus Lalb_Chr21g0316531 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Lalb_Chr21 + View
Lotus japonicus Lj5g0004050 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) chr5 - View
Lotus japonicus Lj1g0002598 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) chr1 + View
Lonicera japonica Lju124C45T17 GWHAAZE00000021 - View
Lonicera japonica Lj2A386T83 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_9_30840 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_5_162080 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_81600 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Lsat_1_v8_lg_8 + View
Malus domestica MD12G1075300 Cyclin-like family protein Chr12 - View
Malus domestica MD14G1073800 Cyclin-like family protein Chr14 - View
Manihot esculenta Manes.09G018200 Chromosome09 + View
Manihot esculenta Manes.08G052800 Chromosome08 - View
Medicago truncatula Medtr7g091230 transcription initiation factor IIB chr7 - View
Medicago truncatula Medtr1g053065 transcription initiation factor IIB chr1 - View
Nelumbo nucifera Nn2g15172 chr2 - View
Nicotiana tabacum Nitab4.5_0000364g0050 Transcription factor TFIIB, Cyclin-like, Transcription factor TFIIB, cyclin-like domain, Transcription factor TFIIB, conserved site, Zinc finger, TFIIB-type Nitab4.5_0000364 - View
Nicotiana tabacum Nitab4.5_0003307g0030 Transcription factor TFIIB, Cyclin-like, Transcription factor TFIIB, cyclin-like domain, Zinc finger, TFIIB-type Nitab4.5_0003307 - View
Nicotiana tabacum Nitab4.5_0000082g0190 Cyclin-like, Transcription factor TFIIB, conserved site, Transcription factor TFIIB, Zinc finger, TFIIB-type, Transcription factor TFIIB, cyclin-like domain Nitab4.5_0000082 + View
Olea europaea Oeu023116.1 chr17 + View
Olea europaea Oeu008166.1 chr2 + View
Petunia axillaris Peaxi162Scf00109g01523 Transcription initiation factor IIB-2 Peaxi162Scf00109 + View
Petunia axillaris Peaxi162Scf00002g02821 Transcription initiation factor IIB-2 Peaxi162Scf00002 + View
Punica granatum PGR004G1049 NC_045131.1 + View
Prunus persica Prupe.7G055400 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Pp07 - View
Pisum sativum Psat3g074080 Transcription initiation factor IIB signature chr3LG5 + View
Populus trichocarpa Potri.016G057100 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr16 + View
Populus trichocarpa Potri.006G048400 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr06 - View
Phaseolus vulgaris Phvul.001G130000 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr01 - View
Phaseolus vulgaris Phvul.007G251400 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Chr07 - View
Quercus lobata QL07p002691 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0483261 RcHm_v2.0_Chr3 + View
Striga asiatica SGA_v2.0_scaffold105G30392 scaffold105 - View
Salvia bowleyana SalBow6G3994 GWHASIU00000002 - View
Salix brachista Sabra16G0060000 GWHAAZH00000016 + View
Salix brachista Sabra06G0033700 GWHAAZH00000006 - View
Simmondsia chinensis Sc25g0005340 GWHAASQ00000025 + View
Sechium edule Sed0001895 LG14 - View
Solanum lycopersicum Solyc10g079360.3 Transcription initiation factor IIB (AHRD V3.3 *** A0A2G2YP06_CAPAN) SL4.0ch10 - View
Solanum lycopersicum Solyc10g079990.3 Transcription initiation factor IIB (AHRD V3.3 *** A0A2G3BH71_CAPCH) SL4.0ch10 - View
Schrenkiella parvula Sp4g23870 K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) ch4-6 - View
Solanum pennellii Sopen10g030000 Cyclin-like family protein | FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity | INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related , Cyclin-like , Transcription factor TFIIB, cyclin-related , Cyclin-related , Zinc finger, TFIIB-type , Cyclin | BEST Arabidopsis thaliana protein match is: transcription factor IIB Spenn-ch10 - View
Solanum pennellii Sopen10g030610 Cyclin-like family protein | FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity | INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related , Cyclin-like , Transcription factor TFIIB, cyclin-related , Cyclin-related , Zinc finger, TFIIB-type , Cyclin | BEST Arabidopsis thaliana protein match is: transcription factor IIB Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400023693 Transcription initiation factor IIB-2 ST4.03ch10 + View
Selenicereus undatus Hund19142 Scaffold_33673 - View
Trochodendron aralioides TAR636G3057 group1 - View
Trochodendron aralioides TAR633G0206 group2 + View
Theobroma cacao Thecc.05G150600 Cyclin-like family protein Chromosome_5 + View
Tarenaya hassleriana THA.LOC104802033 transcription initiation factor IIB-2-like NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104824431 transcription initiation factor IIB-2-like NW_010966881.1 - View
Trifolium pratense TPR.G19655 Tp57577_TGAC_v2_scaf_323 + View
Tripterygium wilfordii TWI53G1442 NC_052244.1 - View
Tripterygium wilfordii TWI77G0498 NC_052236.1 - View
Vaccinium macrocarpon vmacro09069 Similar to TFIIB2: Transcription initiation factor IIB-2 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0356 CM024071.1 + View
Vitis vinifera GSVIVG01033246001 chr8 + View