Gene: AT3G57370
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G57370
- Transcript Identifier AT3G57370.1
- Gene Type Coding gene
- Location Chr3 : 21226839-21228475 : negative
Gene Family Information
- ID HOM05D001573
- #Genes/#Species 406/100
- Phylogenetic origin
- ID ORTHO05D001660
- #Genes/#Species 373/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G57370.1
- Alias BRP4
- uniprot Q1PEE4
Descriptions
- Description Cyclin family protein
- Computational description Cyclin family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1); Has 1320 Blast hits to 1319 proteins in 324 species: Archae - 441; Bacteria - 0; Metazoa - 207; Fungi - 261; Plants - 140; Viruses - 3; Other Eukaryotes - 268 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0070897 | IEA | Gene Ontology | transcription preinitiation complex assembly | |
GO:0070897 | IEA | InterPro | transcription preinitiation complex assembly | |
GO:0009555 | IMP | Gene Ontology | pollen development | 1 |
GO:0055046 | IMP | Gene Ontology | microgametogenesis | 1 |
GO:0006352 | IEA | GOA Database | DNA-templated transcription, initiation | |
GO:0006352 | IBA | Gene Ontology | DNA-templated transcription, initiation | 2 |
GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0017025 | IEA | GOA Database | TBP-class protein binding | |
GO:0017025 | IBA | Gene Ontology | TBP-class protein binding | 2 |
GO:0017025 | IEA | InterPro | TBP-class protein binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 2 |
GO:0097550 | IBA | Gene Ontology | transcription preinitiation complex | 2 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |