Gene: AT3G57370

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G57370
  • Transcript Identifier AT3G57370.1
  • Gene Type Coding gene
  • Location Chr3 : 21226839-21228475 : negative

Gene Family Information

  • ID HOM05D001573
  • #Genes/#Species 406/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G57370.1
  • Alias BRP4
  • uniprot Q1PEE4

Descriptions

  • Description Cyclin family protein
  • Computational description Cyclin family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1); Has 1320 Blast hits to 1319 proteins in 324 species: Archae - 441; Bacteria - 0; Metazoa - 207; Fungi - 261; Plants - 140; Viruses - 3; Other Eukaryotes - 268 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070897
IEA
Gene Ontologytranscription preinitiation complex assembly
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0009555
IMP
Gene Ontologypollen development1
GO:0055046
IMP
Gene Ontologymicrogametogenesis1
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IBA
Gene OntologyDNA-templated transcription, initiation2
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017025
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IBA
Gene OntologyTBP-class protein binding2
GO:0017025
IEA
InterProTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 2
GO:0097550
IBA
Gene Ontologytranscription preinitiation complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR013150 Transcription factor TFIIB, cyclin-like domain
IPR013763 Cyclin-like
IPR000812 Transcription factor TFIIB
Mapman id Description
35.1 not assigned.annotated