Gene: Lsat_1_v5_gn_8_81600

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_81600
  • Transcript Identifier Lsat_1_v5_gn_8_81600.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 117365144-117366566 : positive

Gene Family Information

  • ID HOM05D001573
  • #Genes/#Species 406/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_81600.v5
  • pacid 38951496

Descriptions

  • Description K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0010183
ISO
PLAZA Integrative Orthologypollen tube guidance AT2G41630
GO:0000769
ISO
PLAZA Integrative Orthologysyncytium formation by mitosis without cytokinesis AT3G29380
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT3G57370
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G57370
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G29380
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT3G29380
GO:0080092
ISO
PLAZA Integrative Orthologyregulation of pollen tube growth AT2G41630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017025
IEA
InterProTBP-class protein binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G41630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G10330
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G10330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR013137 Zinc finger, TFIIB-type
IPR013150 Transcription factor TFIIB, cyclin-like domain
IPR000812 Transcription factor TFIIB
IPR013763 Cyclin-like
Mapman id Description
15.3.3.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.basal transcription factor (TFIIb)