Functional clusters

Information

  • Type Gene Ontology
  • Description organic cyclic compound catabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_173 5 23 0.000744061
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_173 5 23 0.000744061

Available child term results

Ontology identifier Description Number of clusters
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 18
GO:0000256 allantoin catabolic process 2
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 8
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 10
GO:0000292 RNA fragment catabolic process 4
GO:0000737 DNA catabolic process, endonucleolytic 16
GO:0006148 inosine catabolic process 18
GO:0006154 adenosine catabolic process 38
GO:0006210 thymine catabolic process 10
GO:0006308 DNA catabolic process 40
GO:0006559 L-phenylalanine catabolic process 6
GO:0006569 tryptophan catabolic process 18
GO:0006572 tyrosine catabolic process 6
GO:0006788 heme oxidation 2
GO:0009134 nucleoside diphosphate catabolic process 2
GO:0009143 nucleoside triphosphate catabolic process 14
GO:0009166 nucleotide catabolic process 2
GO:0009972 cytidine deamination 8
GO:0015938 coenzyme A catabolic process 2
GO:0016075 rRNA catabolic process 6
GO:0016127 sterol catabolic process 10
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA 30
GO:0034655 nucleobase-containing compound catabolic process 2
GO:0042167 heme catabolic process 4
GO:0042344 indole glucosinolate catabolic process 2
GO:0043137 DNA replication, removal of RNA primer 2
GO:0046244 salicylic acid catabolic process 42
GO:0046256 2,4,6-trinitrotoluene catabolic process 26
GO:0046274 lignin catabolic process 2
GO:0048255 mRNA stabilization 4
GO:0061158 3'-UTR-mediated mRNA destabilization 4
GO:0070481 nuclear-transcribed mRNA catabolic process, non-stop decay 2
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go decay 26
GO:0071049 nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription 2
GO:0072523 purine-containing compound catabolic process 2
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:1902190 2-methylbutanoyl-CoA(4-) catabolic process 6
GO:1903647 negative regulation of chlorophyll catabolic process 10
GO:2001294 malonyl-CoA catabolic process 18

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001