Functional clusters

Information

  • Type Gene Ontology
  • Description nucleoside phosphate binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 3 CH_arhy_319 30 80 0.000000749107
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 3 CH_arhy_374 29 79 0.00000302064
Amborella trichopoda AmTr_v1.0_scaffold00071 3 CH_atr_164 19 51 0.0000130603
Gossypium hirsutum D02 3 CH_ghi_414 16 29 0.0000698987
Helianthus annuus HanXRQChr04 3 CH_han_336 14 19 0.0000015565
Lonicera japonica GWHAAZE00000009 3 CH_lonja_289 28 76 0.00000171798
Lonicera japonica GWHAAZE00000004 3 CH_lonja_425 12 18 0.000130833
Medicago truncatula chr7 3 CH_mtr_589 17 40 0.000174234
Petunia axillaris Peaxi162Scf00128 3 CH_pax_313 17 45 0.000462755
Sechium edule LG06 3 CH_sed_218 24 71 0.000265565
Sequoiadendron giganteum chr3 3 CH_sgi_1252 10 12 0.000430637
Vitis vinifera chr10 3 CH_vvi_204 28 77 0.00000570896
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 4 CH_arhy_319 30 80 0.000000749107
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 4 CH_arhy_374 29 79 0.00000302064
Amborella trichopoda AmTr_v1.0_scaffold00071 4 CH_atr_164 19 51 0.0000130603
Gossypium hirsutum D02 4 CH_ghi_414 16 29 0.0000698987
Helianthus annuus HanXRQChr04 4 CH_han_336 14 19 0.0000015565
Lonicera japonica GWHAAZE00000009 4 CH_lonja_289 28 76 0.00000171798
Lonicera japonica GWHAAZE00000004 4 CH_lonja_425 12 18 0.000130833
Medicago truncatula chr7 4 CH_mtr_589 17 40 0.000174234
Petunia axillaris Peaxi162Scf00128 4 CH_pax_313 17 45 0.000462755
Sechium edule LG06 4 CH_sed_218 24 71 0.000265565
Sequoiadendron giganteum chr3 4 CH_sgi_1252 10 12 0.000430637
Vitis vinifera chr10 4 CH_vvi_204 28 77 0.00000570896

Available child term results

Ontology identifier Description Number of clusters
GO:0000062 fatty-acyl-CoA binding 4
GO:0000774 adenyl-nucleotide exchange factor activity 10
GO:0005524 ATP binding 56
GO:0005525 GTP binding 14
GO:0010181 FMN binding 84
GO:0016208 AMP binding 2
GO:0017076 purine nucleotide binding 6
GO:0019001 guanyl nucleotide binding 10
GO:0019003 GDP binding 4
GO:0032553 ribonucleotide binding 52
GO:0032555 purine ribonucleotide binding 14
GO:0043531 ADP binding 1320
GO:0050660 flavin adenine dinucleotide binding 316
GO:0050661 NADP binding 8
GO:0051287 NAD binding 38
GO:0070401 NADP+ binding 18
GO:0070402 NADPH binding 2
GO:0070403 NAD+ binding 12
GO:0071949 FAD binding 174

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001