Functional clusters
Information
- Type Gene Ontology
- Description FMN binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr13 | 3 | CH_acertr_233 | 3 | 3 | 0.0000084987 |
| Aquilegia oxysepala | CHR02 | 3 | CH_aox_61 | 4 | 4 | 0.0000000231377 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 3 | CH_arhy_460 | 4 | 9 | 0.0000481928 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_518 | 5 | 34 | 0.000156081 |
| Amborella trichopoda | AmTr_v1.0_scaffold00071 | 3 | CH_atr_56 | 5 | 7 | 0.000000000412109 |
| Cannabis sativa | NC_044371.1 | 3 | CH_cansat_134 | 4 | 9 | 0.000000639062 |
| Capsicum annuum | PGAv.1.6.scaffold855 | 3 | CH_can_265 | 3 | 3 | 0.0000374066 |
| Coffea canephora | chr10 | 3 | CH_ccan_100 | 4 | 28 | 0.000000432992 |
| Carya illinoinensis | Chr03 | 3 | CH_cil_146 | 5 | 6 | 0.000000000810778 |
| Carya illinoinensis | Chr04 | 3 | CH_cil_26 | 9 | 9 | 2.73895e-22 |
| Corchorus olitorius | AWUE01016378.1 | 3 | CH_col_52 | 3 | 3 | 0.0000281603 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3163 | 3 | CH_cqu_270 | 4 | 8 | 0.0000108468 |
| Cucumis sativus L. | chr7 | 3 | CH_csa_163 | 3 | 3 | 0.0000381945 |
| Daucus carota | DCARv2_Chr1 | 3 | CH_dca_181 | 4 | 9 | 0.00000644879 |
| Durio zibethinus | NW_019167915.1 | 3 | CH_dzi_214 | 3 | 3 | 0.0000557346 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 3 | CH_eca_91 | 4 | 4 | 0.0000000179029 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_39 | 11 | 12 | 2.65619e-28 |
| Erythranthe guttata | scaffold_2 | 3 | CH_egut_17 | 9 | 9 | 1.05561e-22 |
| Fragaria x ananassa | Fvb5-2 | 3 | CH_fan_202 | 4 | 6 | 0.00000130895 |
| Fragaria x ananassa | Fvb1-1 | 3 | CH_fan_371 | 3 | 3 | 0.000093525 |
| Fragaria x ananassa | Fvb1-4 | 3 | CH_fan_57 | 5 | 5 | 0.0000000000808579 |
| Fragaria vesca | Fvb1 | 3 | CH_fve_41 | 6 | 7 | 0.000000000000123715 |
| Helianthus annuus | HanXRQChr10 | 3 | CH_han_491 | 3 | 3 | 0.0000766511 |
| Lupinus albus | Lalb_Chr07 | 3 | CH_lal_225 | 3 | 3 | 0.0000509895 |
| Lotus japonicus | Contig00408 | 3 | CH_lja_291 | 3 | 4 | 0.000238167 |
| Lonicera japonica | GWHAAZE00000006 | 3 | CH_lonja_415 | 3 | 3 | 0.0000663935 |
| Punica granatum | NC_045134.1 | 3 | CH_pgr_170 | 4 | 6 | 0.000000993625 |
| Pisum sativum | chr7LG7 | 3 | CH_psa_190 | 3 | 3 | 0.0000222695 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_270 | 4 | 6 | 0.000000268268 |
| Papaver somniferum | NC_039365.1 | 3 | CH_pso_79 | 6 | 8 | 0.000000000000202841 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_21 | 11 | 18 | 3.64923e-25 |
| Sechium edule | LG01 | 3 | CH_sed_159 | 3 | 3 | 0.0000456865 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_1068 | 3 | 3 | 0.000121818 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_31 | 17 | 41 | 3.13704e-34 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_60 | 11 | 12 | 1.20665e-26 |
| Solanum lycopersicum | SL4.0ch04 | 3 | CH_sly_365 | 3 | 3 | 0.0000593245 |
| Solanum pennellii | Spenn-ch06 | 3 | CH_spe_252 | 3 | 3 | 0.000021189 |
| Solanum pennellii | Spenn-ch11 | 3 | CH_spe_364 | 3 | 5 | 0.000211647 |
| Selenicereus undatus | Scaffold_2055 | 3 | CH_sun_22 | 5 | 6 | 0.000000000348842 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_135 | 4 | 4 | 0.0000000423847 |
| Theobroma cacao | Chromosome_6 | 3 | CH_tca_310 | 3 | 4 | 0.000159502 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_103 | 4 | 4 | 0.000000111649 |
| Acer truncatum | chr13 | 4 | CH_acertr_233 | 3 | 3 | 0.0000084987 |
| Aquilegia oxysepala | CHR02 | 4 | CH_aox_61 | 4 | 4 | 0.0000000231377 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 4 | CH_arhy_460 | 4 | 9 | 0.0000481928 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_518 | 5 | 34 | 0.000156081 |
| Amborella trichopoda | AmTr_v1.0_scaffold00071 | 4 | CH_atr_56 | 5 | 7 | 0.000000000412109 |
| Cannabis sativa | NC_044371.1 | 4 | CH_cansat_134 | 4 | 9 | 0.000000639062 |
| Capsicum annuum | PGAv.1.6.scaffold855 | 4 | CH_can_265 | 3 | 3 | 0.0000374066 |
| Coffea canephora | chr10 | 4 | CH_ccan_100 | 4 | 28 | 0.000000432992 |
| Carya illinoinensis | Chr03 | 4 | CH_cil_146 | 5 | 6 | 0.000000000810778 |
| Carya illinoinensis | Chr04 | 4 | CH_cil_26 | 9 | 9 | 2.73895e-22 |
| Corchorus olitorius | AWUE01016378.1 | 4 | CH_col_52 | 3 | 3 | 0.0000281603 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3163 | 4 | CH_cqu_270 | 4 | 8 | 0.0000108468 |
| Cucumis sativus L. | chr7 | 4 | CH_csa_163 | 3 | 3 | 0.0000381945 |
| Daucus carota | DCARv2_Chr1 | 4 | CH_dca_181 | 4 | 9 | 0.00000644879 |
| Durio zibethinus | NW_019167915.1 | 4 | CH_dzi_214 | 3 | 3 | 0.0000557346 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 4 | CH_eca_91 | 4 | 4 | 0.0000000179029 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_39 | 11 | 12 | 2.65619e-28 |
| Erythranthe guttata | scaffold_2 | 4 | CH_egut_17 | 9 | 9 | 1.05561e-22 |
| Fragaria x ananassa | Fvb5-2 | 4 | CH_fan_202 | 4 | 6 | 0.00000130895 |
| Fragaria x ananassa | Fvb1-1 | 4 | CH_fan_371 | 3 | 3 | 0.000093525 |
| Fragaria x ananassa | Fvb1-4 | 4 | CH_fan_57 | 5 | 5 | 0.0000000000808579 |
| Fragaria vesca | Fvb1 | 4 | CH_fve_41 | 6 | 7 | 0.000000000000123715 |
| Helianthus annuus | HanXRQChr10 | 4 | CH_han_491 | 3 | 3 | 0.0000766511 |
| Lupinus albus | Lalb_Chr07 | 4 | CH_lal_225 | 3 | 3 | 0.0000509895 |
| Lotus japonicus | Contig00408 | 4 | CH_lja_291 | 3 | 4 | 0.000238167 |
| Lonicera japonica | GWHAAZE00000006 | 4 | CH_lonja_415 | 3 | 3 | 0.0000663935 |
| Punica granatum | NC_045134.1 | 4 | CH_pgr_170 | 4 | 6 | 0.000000993625 |
| Pisum sativum | chr7LG7 | 4 | CH_psa_190 | 3 | 3 | 0.0000222695 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_270 | 4 | 6 | 0.000000268268 |
| Papaver somniferum | NC_039365.1 | 4 | CH_pso_79 | 6 | 8 | 0.000000000000202841 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_21 | 11 | 18 | 3.64923e-25 |
| Sechium edule | LG01 | 4 | CH_sed_159 | 3 | 3 | 0.0000456865 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_1068 | 3 | 3 | 0.000121818 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_31 | 17 | 41 | 3.13704e-34 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_60 | 11 | 12 | 1.20665e-26 |
| Solanum lycopersicum | SL4.0ch04 | 4 | CH_sly_365 | 3 | 3 | 0.0000593245 |
| Solanum pennellii | Spenn-ch06 | 4 | CH_spe_252 | 3 | 3 | 0.000021189 |
| Solanum pennellii | Spenn-ch11 | 4 | CH_spe_364 | 3 | 5 | 0.000211647 |
| Selenicereus undatus | Scaffold_2055 | 4 | CH_sun_22 | 5 | 6 | 0.000000000348842 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_135 | 4 | 4 | 0.0000000423847 |
| Theobroma cacao | Chromosome_6 | 4 | CH_tca_310 | 3 | 4 | 0.000159502 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_103 | 4 | 4 | 0.000000111649 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |