Functional clusters
Information
- Type Gene Ontology
- Description FAD binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group23 | 3 | CH_ach_192 | 3 | 5 | 0.000315597 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 3 | CH_arhy_449 | 3 | 3 | 0.0000314957 |
| Arabidopsis thaliana | Chr4 | 3 | CH_ath_126 | 5 | 9 | 0.0000000162526 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_149 | 5 | 11 | 0.0000000594831 |
| Arabidopsis thaliana | Chr5 | 3 | CH_ath_150 | 6 | 29 | 0.0000000655301 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_87 | 5 | 6 | 0.000000000776077 |
| Amborella trichopoda | AmTr_v1.0_scaffold00099 | 3 | CH_atr_175 | 3 | 3 | 0.000034591 |
| Brassica rapa | A01 | 3 | CH_bra_47 | 6 | 10 | 0.000000000676475 |
| Brassica rapa | A09 | 3 | CH_bra_48 | 6 | 10 | 0.000000000676475 |
| Brassica rapa | A09 | 3 | CH_bra_96 | 5 | 11 | 0.000000751114 |
| Cannabis sativa | NC_044373.1 | 3 | CH_cansat_177 | 3 | 3 | 0.0000189186 |
| Cannabis sativa | NC_044370.1 | 3 | CH_cansat_234 | 3 | 4 | 0.0000756271 |
| Corylus avellana | 1 | 3 | CH_cav_106 | 4 | 5 | 0.000000101004 |
| Citrus clementina | scaffold_7 | 3 | CH_ccl_333 | 3 | 4 | 0.000181327 |
| Citrus clementina | scaffold_1 | 3 | CH_ccl_68 | 7 | 14 | 0.000000000000215316 |
| Carpinus fangiana | Cfa02 | 3 | CH_cfa_38 | 7 | 12 | 0.000000000000626113 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_126 | 5 | 5 | 0.0000000000482627 |
| Carya illinoinensis | Chr03 | 3 | CH_cil_81 | 6 | 7 | 0.000000000000334798 |
| Cucumis melo | chr12 | 3 | CH_cme_11 | 12 | 31 | 1.64649e-21 |
| Cucumis melo | chr08 | 3 | CH_cme_20 | 7 | 7 | 0.00000000000000140929 |
| Cucumis melo | chr01 | 3 | CH_cme_275 | 3 | 4 | 0.000699622 |
| Carica papaya | supercontig_21 | 3 | CH_cpa_50 | 4 | 4 | 0.00000003261 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 3 | CH_cqu_194 | 4 | 4 | 0.000000931836 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 3 | CH_cqu_195 | 4 | 4 | 0.000000931836 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1611 | 3 | CH_cqu_470 | 3 | 3 | 0.00043701 |
| Chlamydomonas reinhardtii | chromosome_2 | 3 | CH_cre_70 | 5 | 42 | 0.000145338 |
| Daucus carota | DCARv2_Chr4 | 3 | CH_dca_166 | 5 | 9 | 0.0000028213 |
| Daucus carota | DCARv2_Chr4 | 3 | CH_dca_167 | 5 | 9 | 0.0000028213 |
| Daucus carota | DCARv2_Chr2 | 3 | CH_dca_92 | 5 | 5 | 0.0000000226676 |
| Durio zibethinus | NW_019168270.1 | 3 | CH_dzi_123 | 5 | 9 | 0.000000719711 |
| Durio zibethinus | NW_019168015.1 | 3 | CH_dzi_200 | 4 | 7 | 0.0000441858 |
| Durio zibethinus | NW_019167904.1 | 3 | CH_dzi_28 | 8 | 12 | 0.0000000000000155963 |
| Durio zibethinus | NW_019168381.1 | 3 | CH_dzi_313 | 3 | 3 | 0.000553286 |
| Durio zibethinus | NW_019168037.1 | 3 | CH_dzi_46 | 8 | 21 | 0.0000000000062993 |
| Durio zibethinus | NW_019167838.1 | 3 | CH_dzi_98 | 5 | 7 | 0.0000000603184 |
| Eucalyptus grandis | Chr09 | 3 | CH_egr_153 | 8 | 12 | 3.23747e-16 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_216 | 6 | 6 | 0.000000000000354839 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_270 | 7 | 18 | 0.0000000000153287 |
| Eucalyptus grandis | Chr09 | 3 | CH_egr_75 | 10 | 13 | 3.17715e-22 |
| Erythranthe guttata | scaffold_1 | 3 | CH_egut_62 | 6 | 7 | 0.000000000000237258 |
| Fragaria x ananassa | Fvb2-2 | 3 | CH_fan_127 | 4 | 4 | 0.0000000384841 |
| Fragaria vesca | Fvb1 | 3 | CH_fve_240 | 3 | 4 | 0.0000478683 |
| Gossypium raimondii | Chr02 | 3 | CH_gra_120 | 4 | 4 | 0.000000075438 |
| Helianthus annuus | HanXRQChr12 | 3 | CH_han_47 | 8 | 14 | 5.4676e-17 |
| Helianthus annuus | HanXRQChr13 | 3 | CH_han_470 | 3 | 3 | 0.0000412688 |
| Helianthus annuus | HanXRQChr04 | 3 | CH_han_94 | 6 | 9 | 0.00000000000227282 |
| Lupinus albus | Lalb_Chr15 | 3 | CH_lal_177 | 4 | 5 | 0.00000438324 |
| Lupinus albus | Lalb_Chr07 | 3 | CH_lal_350 | 3 | 3 | 0.000408089 |
| Lotus japonicus | chr5 | 3 | CH_lja_197 | 3 | 3 | 0.000034478 |
| Lonicera japonica | GWHAAZE00000003 | 3 | CH_lonja_125 | 8 | 32 | 0.00000000000478386 |
| Lonicera japonica | GWHAAZE00000007 | 3 | CH_lonja_316 | 4 | 7 | 0.0000051767 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 3 | CH_lsa_441 | 3 | 6 | 0.000355683 |
| Magnolia biondii | Chr08 | 3 | CH_mbi_448 | 4 | 21 | 0.000108808 |
| Magnolia biondii | Chr03 | 3 | CH_mbi_449 | 3 | 4 | 0.000109893 |
| Medicago truncatula | chr1 | 3 | CH_mtr_502 | 3 | 4 | 0.000045508 |
| Oryza sativa ssp. japonica | chr08 | 3 | CH_osa_397 | 3 | 3 | 0.000318288 |
| Oryza sativa ssp. japonica | chr06 | 3 | CH_osa_63 | 7 | 16 | 0.0000000000286747 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_86 | 6 | 10 | 0.000000000495442 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_111 | 5 | 6 | 0.0000000100106 |
| Punica granatum | NC_045128.1 | 3 | CH_pgr_338 | 3 | 3 | 0.000335393 |
| Punica granatum | NC_045133.1 | 3 | CH_pgr_37 | 8 | 14 | 0.000000000000048555 |
| Prunus persica | Pp08 | 3 | CH_ppe_347 | 3 | 4 | 0.00012191 |
| Papaver somniferum | NC_039363.1 | 3 | CH_pso_201 | 5 | 12 | 0.00000000986557 |
| Papaver somniferum | NC_039358.1 | 3 | CH_pso_90 | 6 | 9 | 0.000000000000673336 |
| Populus trichocarpa | Chr19 | 3 | CH_ptr_43 | 7 | 7 | 3.02453e-17 |
| Phaseolus vulgaris | Chr07 | 3 | CH_pvu_303 | 4 | 21 | 0.000287065 |
| Quercus lobata | 5 | 3 | CH_qlo_6 | 17 | 19 | 1.44963e-39 |
| Quercus lobata | 6 | 3 | CH_qlo_642 | 4 | 6 | 0.0000143914 |
| Quercus lobata | 11 | 3 | CH_qlo_73 | 10 | 13 | 2.37359e-20 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_116 | 7 | 19 | 0.000000000000845626 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_390 | 4 | 9 | 0.00000389478 |
| Salix brachista | GWHAAZH00000016 | 3 | CH_sbr_226 | 3 | 3 | 0.0000502476 |
| Simmondsia chinensis | GWHAASQ00000006 | 3 | CH_sci_181 | 3 | 3 | 0.0001342 |
| Simmondsia chinensis | GWHAASQ00000001 | 3 | CH_sci_182 | 3 | 3 | 0.0001342 |
| Simmondsia chinensis | GWHAASQ00000006 | 3 | CH_sci_84 | 4 | 5 | 0.00000114115 |
| Sequoiadendron giganteum | HRSCAF_1 | 3 | CH_sgi_1176 | 3 | 3 | 0.000194865 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_1177 | 3 | 3 | 0.000194865 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_414 | 6 | 11 | 0.000000000371492 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_421 | 5 | 5 | 0.000000000511298 |
| Sequoiadendron giganteum | chr11 | 3 | CH_sgi_740 | 4 | 5 | 0.00000158805 |
| Solanum tuberosum | ST4.03ch06 | 3 | CH_stu_510 | 3 | 3 | 0.000265996 |
| Trochodendron aralioides | group5 | 3 | CH_tar_27 | 6 | 7 | 0.000000000000136003 |
| Trochodendron aralioides | group11 | 3 | CH_tar_305 | 3 | 4 | 0.000117914 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_172 | 4 | 10 | 0.0000158078 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_193 | 3 | 3 | 0.0000582231 |
| Vigna mungo | CM024071.1 | 3 | CH_vmu_215 | 4 | 22 | 0.000183856 |
| Zea mays | 9 | 3 | CH_zma_218 | 5 | 25 | 0.000136288 |
| Actinidia chinensis | Lachesis_group23 | 4 | CH_ach_192 | 3 | 5 | 0.000315597 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 4 | CH_arhy_449 | 3 | 3 | 0.0000314957 |
| Arabidopsis thaliana | Chr4 | 4 | CH_ath_126 | 5 | 9 | 0.0000000162526 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_149 | 5 | 11 | 0.0000000594831 |
| Arabidopsis thaliana | Chr5 | 4 | CH_ath_150 | 6 | 29 | 0.0000000655301 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_87 | 5 | 6 | 0.000000000776077 |
| Amborella trichopoda | AmTr_v1.0_scaffold00099 | 4 | CH_atr_175 | 3 | 3 | 0.000034591 |
| Brassica rapa | A01 | 4 | CH_bra_47 | 6 | 10 | 0.000000000676475 |
| Brassica rapa | A09 | 4 | CH_bra_48 | 6 | 10 | 0.000000000676475 |
| Brassica rapa | A09 | 4 | CH_bra_96 | 5 | 11 | 0.000000751114 |
| Cannabis sativa | NC_044373.1 | 4 | CH_cansat_177 | 3 | 3 | 0.0000189186 |
| Cannabis sativa | NC_044370.1 | 4 | CH_cansat_234 | 3 | 4 | 0.0000756271 |
| Corylus avellana | 1 | 4 | CH_cav_106 | 4 | 5 | 0.000000101004 |
| Citrus clementina | scaffold_7 | 4 | CH_ccl_333 | 3 | 4 | 0.000181327 |
| Citrus clementina | scaffold_1 | 4 | CH_ccl_68 | 7 | 14 | 0.000000000000215316 |
| Carpinus fangiana | Cfa02 | 4 | CH_cfa_38 | 7 | 12 | 0.000000000000626113 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_126 | 5 | 5 | 0.0000000000482627 |
| Carya illinoinensis | Chr03 | 4 | CH_cil_81 | 6 | 7 | 0.000000000000334798 |
| Cucumis melo | chr12 | 4 | CH_cme_11 | 12 | 31 | 1.64649e-21 |
| Cucumis melo | chr08 | 4 | CH_cme_20 | 7 | 7 | 0.00000000000000140929 |
| Cucumis melo | chr01 | 4 | CH_cme_275 | 3 | 4 | 0.000699622 |
| Carica papaya | supercontig_21 | 4 | CH_cpa_50 | 4 | 4 | 0.00000003261 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 4 | CH_cqu_194 | 4 | 4 | 0.000000931836 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 4 | CH_cqu_195 | 4 | 4 | 0.000000931836 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1611 | 4 | CH_cqu_470 | 3 | 3 | 0.00043701 |
| Chlamydomonas reinhardtii | chromosome_2 | 4 | CH_cre_70 | 5 | 42 | 0.000145338 |
| Daucus carota | DCARv2_Chr4 | 4 | CH_dca_166 | 5 | 9 | 0.0000028213 |
| Daucus carota | DCARv2_Chr4 | 4 | CH_dca_167 | 5 | 9 | 0.0000028213 |
| Daucus carota | DCARv2_Chr2 | 4 | CH_dca_92 | 5 | 5 | 0.0000000226676 |
| Durio zibethinus | NW_019168270.1 | 4 | CH_dzi_123 | 5 | 9 | 0.000000719711 |
| Durio zibethinus | NW_019168015.1 | 4 | CH_dzi_200 | 4 | 7 | 0.0000441858 |
| Durio zibethinus | NW_019167904.1 | 4 | CH_dzi_28 | 8 | 12 | 0.0000000000000155963 |
| Durio zibethinus | NW_019168381.1 | 4 | CH_dzi_313 | 3 | 3 | 0.000553286 |
| Durio zibethinus | NW_019168037.1 | 4 | CH_dzi_46 | 8 | 21 | 0.0000000000062993 |
| Durio zibethinus | NW_019167838.1 | 4 | CH_dzi_98 | 5 | 7 | 0.0000000603184 |
| Eucalyptus grandis | Chr09 | 4 | CH_egr_153 | 8 | 12 | 3.23747e-16 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_216 | 6 | 6 | 0.000000000000354839 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_270 | 7 | 18 | 0.0000000000153287 |
| Eucalyptus grandis | Chr09 | 4 | CH_egr_75 | 10 | 13 | 3.17715e-22 |
| Erythranthe guttata | scaffold_1 | 4 | CH_egut_62 | 6 | 7 | 0.000000000000237258 |
| Fragaria x ananassa | Fvb2-2 | 4 | CH_fan_127 | 4 | 4 | 0.0000000384841 |
| Fragaria vesca | Fvb1 | 4 | CH_fve_240 | 3 | 4 | 0.0000478683 |
| Gossypium raimondii | Chr02 | 4 | CH_gra_120 | 4 | 4 | 0.000000075438 |
| Helianthus annuus | HanXRQChr12 | 4 | CH_han_47 | 8 | 14 | 5.4676e-17 |
| Helianthus annuus | HanXRQChr13 | 4 | CH_han_470 | 3 | 3 | 0.0000412688 |
| Helianthus annuus | HanXRQChr04 | 4 | CH_han_94 | 6 | 9 | 0.00000000000227282 |
| Lupinus albus | Lalb_Chr15 | 4 | CH_lal_177 | 4 | 5 | 0.00000438324 |
| Lupinus albus | Lalb_Chr07 | 4 | CH_lal_350 | 3 | 3 | 0.000408089 |
| Lotus japonicus | chr5 | 4 | CH_lja_197 | 3 | 3 | 0.000034478 |
| Lonicera japonica | GWHAAZE00000003 | 4 | CH_lonja_125 | 8 | 32 | 0.00000000000478386 |
| Lonicera japonica | GWHAAZE00000007 | 4 | CH_lonja_316 | 4 | 7 | 0.0000051767 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 4 | CH_lsa_441 | 3 | 6 | 0.000355683 |
| Magnolia biondii | Chr08 | 4 | CH_mbi_448 | 4 | 21 | 0.000108808 |
| Magnolia biondii | Chr03 | 4 | CH_mbi_449 | 3 | 4 | 0.000109893 |
| Medicago truncatula | chr1 | 4 | CH_mtr_502 | 3 | 4 | 0.000045508 |
| Oryza sativa ssp. japonica | chr08 | 4 | CH_osa_397 | 3 | 3 | 0.000318288 |
| Oryza sativa ssp. japonica | chr06 | 4 | CH_osa_63 | 7 | 16 | 0.0000000000286747 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_86 | 6 | 10 | 0.000000000495442 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_111 | 5 | 6 | 0.0000000100106 |
| Punica granatum | NC_045128.1 | 4 | CH_pgr_338 | 3 | 3 | 0.000335393 |
| Punica granatum | NC_045133.1 | 4 | CH_pgr_37 | 8 | 14 | 0.000000000000048555 |
| Prunus persica | Pp08 | 4 | CH_ppe_347 | 3 | 4 | 0.00012191 |
| Papaver somniferum | NC_039363.1 | 4 | CH_pso_201 | 5 | 12 | 0.00000000986557 |
| Papaver somniferum | NC_039358.1 | 4 | CH_pso_90 | 6 | 9 | 0.000000000000673336 |
| Populus trichocarpa | Chr19 | 4 | CH_ptr_43 | 7 | 7 | 3.02453e-17 |
| Phaseolus vulgaris | Chr07 | 4 | CH_pvu_303 | 4 | 21 | 0.000287065 |
| Quercus lobata | 5 | 4 | CH_qlo_6 | 17 | 19 | 1.44963e-39 |
| Quercus lobata | 6 | 4 | CH_qlo_642 | 4 | 6 | 0.0000143914 |
| Quercus lobata | 11 | 4 | CH_qlo_73 | 10 | 13 | 2.37359e-20 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_116 | 7 | 19 | 0.000000000000845626 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_390 | 4 | 9 | 0.00000389478 |
| Salix brachista | GWHAAZH00000016 | 4 | CH_sbr_226 | 3 | 3 | 0.0000502476 |
| Simmondsia chinensis | GWHAASQ00000006 | 4 | CH_sci_181 | 3 | 3 | 0.0001342 |
| Simmondsia chinensis | GWHAASQ00000001 | 4 | CH_sci_182 | 3 | 3 | 0.0001342 |
| Simmondsia chinensis | GWHAASQ00000006 | 4 | CH_sci_84 | 4 | 5 | 0.00000114115 |
| Sequoiadendron giganteum | HRSCAF_1 | 4 | CH_sgi_1176 | 3 | 3 | 0.000194865 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_1177 | 3 | 3 | 0.000194865 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_414 | 6 | 11 | 0.000000000371492 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_421 | 5 | 5 | 0.000000000511298 |
| Sequoiadendron giganteum | chr11 | 4 | CH_sgi_740 | 4 | 5 | 0.00000158805 |
| Solanum tuberosum | ST4.03ch06 | 4 | CH_stu_510 | 3 | 3 | 0.000265996 |
| Trochodendron aralioides | group5 | 4 | CH_tar_27 | 6 | 7 | 0.000000000000136003 |
| Trochodendron aralioides | group11 | 4 | CH_tar_305 | 3 | 4 | 0.000117914 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_172 | 4 | 10 | 0.0000158078 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_193 | 3 | 3 | 0.0000582231 |
| Vigna mungo | CM024071.1 | 4 | CH_vmu_215 | 4 | 22 | 0.000183856 |
| Zea mays | 9 | 4 | CH_zma_218 | 5 | 25 | 0.000136288 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |