Functional clusters
Information
- Type Gene Ontology
- Description ATP binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr6 | 3 | CH_acertr_256 | 8 | 9 | 0.000018959 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 3 | CH_arhy_323 | 25 | 80 | 0.000000822059 |
| Cannabis sativa | NC_044371.1 | 3 | CH_cansat_86 | 25 | 80 | 0.00000000498537 |
| Cicer arietinum L. | Ca_LG6_v3 | 3 | CH_car_192 | 13 | 30 | 0.000545263 |
| Corylus avellana | 2 | 3 | CH_cav_278 | 11 | 18 | 0.0000943757 |
| Corylus avellana | 1 | 3 | CH_cav_279 | 12 | 22 | 0.000108562 |
| Citrus clementina | scaffold_6 | 3 | CH_ccl_121 | 17 | 26 | 0.00000000418265 |
| Citrus clementina | scaffold_4 | 3 | CH_ccl_406 | 12 | 23 | 0.000611054 |
| Carya illinoinensis | Chr01 | 3 | CH_cil_85 | 22 | 33 | 0.000000000000646442 |
| Durio zibethinus | NW_019167960.1 | 3 | CH_dzi_199 | 24 | 75 | 0.0000422511 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 3 | CH_eca_41 | 27 | 73 | 0.0000000000454616 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_381 | 12 | 12 | 0.00000000519766 |
| Fragaria x ananassa | Fvb4-3 | 3 | CH_fan_290 | 16 | 38 | 0.0000147995 |
| Glycine max | Gm18 | 3 | CH_gma_267 | 8 | 8 | 0.0000237448 |
| Lotus japonicus | chr6 | 3 | CH_lja_210 | 10 | 14 | 0.0000593236 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 3 | CH_lsa_78 | 22 | 38 | 0.0000000000101117 |
| Manihot esculenta | Chromosome11 | 3 | CH_mes_299 | 18 | 50 | 0.000118308 |
| Populus trichocarpa | Chr15 | 3 | CH_ptr_344 | 11 | 17 | 0.000126629 |
| Phaseolus vulgaris | Chr09 | 3 | CH_pvu_302 | 9 | 12 | 0.000276544 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_428 | 11 | 17 | 0.0000111234 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 3 | CH_rch_451 | 9 | 11 | 0.0000183793 |
| Rhododendron simsii | chr11 | 3 | CH_rsi_200 | 11 | 13 | 0.000000120924 |
| Sechium edule | LG06 | 3 | CH_sed_144 | 8 | 8 | 0.0000166485 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_1053 | 12 | 21 | 0.000101238 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_1246 | 7 | 7 | 0.00036124 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_252 | 20 | 27 | 0.000000000000207557 |
| Sequoiadendron giganteum | chr11 | 3 | CH_sgi_844 | 11 | 15 | 0.00000934727 |
| Vigna mungo | CM024074.1 | 3 | CH_vmu_212 | 15 | 39 | 0.000173574 |
| Acer truncatum | chr6 | 4 | CH_acertr_256 | 8 | 9 | 0.000018959 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 4 | CH_arhy_323 | 25 | 80 | 0.000000822059 |
| Cannabis sativa | NC_044371.1 | 4 | CH_cansat_86 | 25 | 80 | 0.00000000498537 |
| Cicer arietinum L. | Ca_LG6_v3 | 4 | CH_car_192 | 13 | 30 | 0.000545263 |
| Corylus avellana | 2 | 4 | CH_cav_278 | 11 | 18 | 0.0000943757 |
| Corylus avellana | 1 | 4 | CH_cav_279 | 12 | 22 | 0.000108562 |
| Citrus clementina | scaffold_6 | 4 | CH_ccl_121 | 17 | 26 | 0.00000000418265 |
| Citrus clementina | scaffold_4 | 4 | CH_ccl_406 | 12 | 23 | 0.000611054 |
| Carya illinoinensis | Chr01 | 4 | CH_cil_85 | 22 | 33 | 0.000000000000646442 |
| Durio zibethinus | NW_019167960.1 | 4 | CH_dzi_199 | 24 | 75 | 0.0000422511 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 4 | CH_eca_41 | 27 | 73 | 0.0000000000454616 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_381 | 12 | 12 | 0.00000000519766 |
| Fragaria x ananassa | Fvb4-3 | 4 | CH_fan_290 | 16 | 38 | 0.0000147995 |
| Glycine max | Gm18 | 4 | CH_gma_267 | 8 | 8 | 0.0000237448 |
| Lotus japonicus | chr6 | 4 | CH_lja_210 | 10 | 14 | 0.0000593236 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 4 | CH_lsa_78 | 22 | 38 | 0.0000000000101117 |
| Manihot esculenta | Chromosome11 | 4 | CH_mes_299 | 18 | 50 | 0.000118308 |
| Populus trichocarpa | Chr15 | 4 | CH_ptr_344 | 11 | 17 | 0.000126629 |
| Phaseolus vulgaris | Chr09 | 4 | CH_pvu_302 | 9 | 12 | 0.000276544 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_428 | 11 | 17 | 0.0000111234 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 4 | CH_rch_451 | 9 | 11 | 0.0000183793 |
| Rhododendron simsii | chr11 | 4 | CH_rsi_200 | 11 | 13 | 0.000000120924 |
| Sechium edule | LG06 | 4 | CH_sed_144 | 8 | 8 | 0.0000166485 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_1053 | 12 | 21 | 0.000101238 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_1246 | 7 | 7 | 0.00036124 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_252 | 20 | 27 | 0.000000000000207557 |
| Sequoiadendron giganteum | chr11 | 4 | CH_sgi_844 | 11 | 15 | 0.00000934727 |
| Vigna mungo | CM024074.1 | 4 | CH_vmu_212 | 15 | 39 | 0.000173574 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |