Functional clusters

Information

  • Type Gene Ontology
  • Description ATP binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 3 CH_acertr_256 8 9 0.000018959
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 3 CH_arhy_323 25 80 0.000000822059
Cannabis sativa NC_044371.1 3 CH_cansat_86 25 80 0.00000000498537
Cicer arietinum L. Ca_LG6_v3 3 CH_car_192 13 30 0.000545263
Corylus avellana 2 3 CH_cav_278 11 18 0.0000943757
Corylus avellana 1 3 CH_cav_279 12 22 0.000108562
Citrus clementina scaffold_6 3 CH_ccl_121 17 26 0.00000000418265
Citrus clementina scaffold_4 3 CH_ccl_406 12 23 0.000611054
Carya illinoinensis Chr01 3 CH_cil_85 22 33 0.000000000000646442
Durio zibethinus NW_019167960.1 3 CH_dzi_199 24 75 0.0000422511
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_41 27 73 0.0000000000454616
Eucalyptus grandis Chr03 3 CH_egr_381 12 12 0.00000000519766
Fragaria x ananassa Fvb4-3 3 CH_fan_290 16 38 0.0000147995
Glycine max Gm18 3 CH_gma_267 8 8 0.0000237448
Lotus japonicus chr6 3 CH_lja_210 10 14 0.0000593236
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_78 22 38 0.0000000000101117
Manihot esculenta Chromosome11 3 CH_mes_299 18 50 0.000118308
Populus trichocarpa Chr15 3 CH_ptr_344 11 17 0.000126629
Phaseolus vulgaris Chr09 3 CH_pvu_302 9 12 0.000276544
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_428 11 17 0.0000111234
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_451 9 11 0.0000183793
Rhododendron simsii chr11 3 CH_rsi_200 11 13 0.000000120924
Sechium edule LG06 3 CH_sed_144 8 8 0.0000166485
Sequoiadendron giganteum chr5 3 CH_sgi_1053 12 21 0.000101238
Sequoiadendron giganteum chr2 3 CH_sgi_1246 7 7 0.00036124
Sequoiadendron giganteum chr3 3 CH_sgi_252 20 27 0.000000000000207557
Sequoiadendron giganteum chr11 3 CH_sgi_844 11 15 0.00000934727
Vigna mungo CM024074.1 3 CH_vmu_212 15 39 0.000173574
Acer truncatum chr6 4 CH_acertr_256 8 9 0.000018959
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 4 CH_arhy_323 25 80 0.000000822059
Cannabis sativa NC_044371.1 4 CH_cansat_86 25 80 0.00000000498537
Cicer arietinum L. Ca_LG6_v3 4 CH_car_192 13 30 0.000545263
Corylus avellana 2 4 CH_cav_278 11 18 0.0000943757
Corylus avellana 1 4 CH_cav_279 12 22 0.000108562
Citrus clementina scaffold_6 4 CH_ccl_121 17 26 0.00000000418265
Citrus clementina scaffold_4 4 CH_ccl_406 12 23 0.000611054
Carya illinoinensis Chr01 4 CH_cil_85 22 33 0.000000000000646442
Durio zibethinus NW_019167960.1 4 CH_dzi_199 24 75 0.0000422511
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_41 27 73 0.0000000000454616
Eucalyptus grandis Chr03 4 CH_egr_381 12 12 0.00000000519766
Fragaria x ananassa Fvb4-3 4 CH_fan_290 16 38 0.0000147995
Glycine max Gm18 4 CH_gma_267 8 8 0.0000237448
Lotus japonicus chr6 4 CH_lja_210 10 14 0.0000593236
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_78 22 38 0.0000000000101117
Manihot esculenta Chromosome11 4 CH_mes_299 18 50 0.000118308
Populus trichocarpa Chr15 4 CH_ptr_344 11 17 0.000126629
Phaseolus vulgaris Chr09 4 CH_pvu_302 9 12 0.000276544
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_428 11 17 0.0000111234
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_451 9 11 0.0000183793
Rhododendron simsii chr11 4 CH_rsi_200 11 13 0.000000120924
Sechium edule LG06 4 CH_sed_144 8 8 0.0000166485
Sequoiadendron giganteum chr5 4 CH_sgi_1053 12 21 0.000101238
Sequoiadendron giganteum chr2 4 CH_sgi_1246 7 7 0.00036124
Sequoiadendron giganteum chr3 4 CH_sgi_252 20 27 0.000000000000207557
Sequoiadendron giganteum chr11 4 CH_sgi_844 11 15 0.00000934727
Vigna mungo CM024074.1 4 CH_vmu_212 15 39 0.000173574

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001