Functional clusters

Information

  • Type Gene Ontology
  • Description positive regulation of cellular biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00007 3 CH_atr_339 5 10 0.000909423
Sequoiadendron giganteum chr8 3 CH_sgi_1172 9 51 0.000185406
Amborella trichopoda AmTr_v1.0_scaffold00007 4 CH_atr_339 5 10 0.000909423
Sequoiadendron giganteum chr8 4 CH_sgi_1172 9 51 0.000185406

Available child term results

Ontology identifier Description Number of clusters
GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response 6
GO:0010116 positive regulation of abscisic acid biosynthetic process 6
GO:0010365 positive regulation of ethylene biosynthetic process 16
GO:0010372 positive regulation of gibberellin biosynthetic process 2
GO:0010513 positive regulation of phosphatidylinositol biosynthetic process 2
GO:0010601 positive regulation of auxin biosynthetic process 2
GO:0010729 positive regulation of hydrogen peroxide biosynthetic process 6
GO:0032212 positive regulation of telomere maintenance via telomerase 2
GO:0032786 positive regulation of DNA-templated transcription, elongation 8
GO:0032877 positive regulation of DNA endoreduplication 4
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 32
GO:0045723 positive regulation of fatty acid biosynthetic process 6
GO:0045727 positive regulation of translation 18
GO:0045893 positive regulation of transcription, DNA-templated 4
GO:0045901 positive regulation of translational elongation 18
GO:0045905 positive regulation of translational termination 2
GO:0045943 positive regulation of transcription by RNA polymerase I 2
GO:0045944 positive regulation of transcription by RNA polymerase II 34
GO:0051973 positive regulation of telomerase activity 14
GO:0060261 positive regulation of transcription initiation from RNA polymerase II promoter 16
GO:0070455 positive regulation of heme biosynthetic process 4
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 8
GO:1900706 positive regulation of siderophore biosynthetic process 96
GO:1901430 positive regulation of syringal lignin biosynthetic process 14
GO:1904143 positive regulation of carotenoid biosynthetic process 4
GO:1904964 positive regulation of phytol biosynthetic process 12
GO:2001011 positive regulation of plant-type cell wall cellulose biosynthetic process 4
GO:2001280 positive regulation of unsaturated fatty acid biosynthetic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001