Functional clusters

Information

  • Type Gene Ontology
  • Description transferase activity, transferring alkyl or aryl (other than methyl) groups

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 3 CH_arhy_150 9 20 0.00000000000952442
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 3 CH_arhy_202 6 6 0.000000000635453
Brassica oleracea C9 3 CH_bol_159 5 8 0.000000956066
Camellia sinensis var. sinensis Chr6 3 CH_camsi_139 8 20 0.000000000216174
Cannabis sativa NC_044370.1 3 CH_cansat_110 6 13 0.0000000989153
Cicer arietinum L. Ca_LG1_v3 3 CH_car_74 4 5 0.000018851
Citrus clementina scaffold_4 3 CH_ccl_32 13 29 3.53542e-17
Citrus clementina scaffold_1 3 CH_ccl_92 7 8 0.000000000085168
Cardamine hirsuta Chr2 3 CH_chi_59 8 16 0.0000000000656301
Chenopodium quinoa C_Quinoa_Scaffold_1695 3 CH_cqu_128 7 14 0.0000000156212
Chenopodium quinoa C_Quinoa_Scaffold_3973 3 CH_cqu_402 4 5 0.0001652
Daucus carota DCARv2_Chr8 3 CH_dca_153 6 15 0.00000133484
Hydrangea macrophylla Hma1.2p1_0300F.1 3 CH_hma_313 3 3 0.000735103
Lotus japonicus Contig00141 3 CH_lja_183 4 4 0.0000163369
Magnolia biondii Chr08 3 CH_mbi_288 4 4 0.00000177359
Phaseolus vulgaris Chr07 3 CH_pvu_34 9 9 1.98416e-17
Salvia bowleyana GWHASIU00000008 3 CH_sbo_75 10 39 0.000000000000409068
Selenicereus undatus Scaffold_33679 3 CH_sun_57 4 4 0.00000211534
Vigna mungo CM024071.1 3 CH_vmu_19 10 32 0.00000000000115107
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 4 CH_arhy_150 9 20 0.00000000000952442
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 4 CH_arhy_202 6 6 0.000000000635453
Brassica oleracea C9 4 CH_bol_159 5 8 0.000000956066
Camellia sinensis var. sinensis Chr6 4 CH_camsi_139 8 20 0.000000000216174
Cannabis sativa NC_044370.1 4 CH_cansat_110 6 13 0.0000000989153
Cicer arietinum L. Ca_LG1_v3 4 CH_car_74 4 5 0.000018851
Citrus clementina scaffold_4 4 CH_ccl_32 13 29 3.53542e-17
Citrus clementina scaffold_1 4 CH_ccl_92 7 8 0.000000000085168
Cardamine hirsuta Chr2 4 CH_chi_59 8 16 0.0000000000656301
Chenopodium quinoa C_Quinoa_Scaffold_1695 4 CH_cqu_128 7 14 0.0000000156212
Chenopodium quinoa C_Quinoa_Scaffold_3973 4 CH_cqu_402 4 5 0.0001652
Daucus carota DCARv2_Chr8 4 CH_dca_153 6 15 0.00000133484
Hydrangea macrophylla Hma1.2p1_0300F.1 4 CH_hma_313 3 3 0.000735103
Lotus japonicus Contig00141 4 CH_lja_183 4 4 0.0000163369
Magnolia biondii Chr08 4 CH_mbi_288 4 4 0.00000177359
Phaseolus vulgaris Chr07 4 CH_pvu_34 9 9 1.98416e-17
Salvia bowleyana GWHASIU00000008 4 CH_sbo_75 10 39 0.000000000000409068
Selenicereus undatus Scaffold_33679 4 CH_sun_57 4 4 0.00000211534
Vigna mungo CM024071.1 4 CH_vmu_19 10 32 0.00000000000115107

Available child term results

Ontology identifier Description Number of clusters
GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity 10
GO:0002094 polyprenyltransferase activity 4
GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity 32
GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity 10
GO:0003962 cystathionine gamma-synthase activity 14
GO:0004124 cysteine synthase activity 62
GO:0004156 dihydropteroate synthase activity 6
GO:0004161 dimethylallyltranstransferase activity 4
GO:0004310 farnesyl-diphosphate farnesyltransferase activity 22
GO:0004311 farnesyltranstransferase activity 16
GO:0004364 glutathione transferase activity 440
GO:0004418 hydroxymethylbilane synthase activity 4
GO:0004478 methionine adenosyltransferase activity 16
GO:0004659 prenyltransferase activity 30
GO:0004660 protein farnesyltransferase activity 2
GO:0004662 CAAX-protein geranylgeranyltransferase activity 6
GO:0004663 Rab geranylgeranyltransferase activity 4
GO:0004746 riboflavin synthase activity 10
GO:0004766 spermidine synthase activity 4
GO:0008318 protein prenyltransferase activity 8
GO:0008495 protoheme IX farnesyltransferase activity 4
GO:0008676 3-deoxy-8-phosphooctulonate synthase activity 14
GO:0008987 quinolinate synthetase A activity 4
GO:0009824 AMP dimethylallyltransferase activity 4
GO:0010355 homogentisate farnesyltransferase activity 4
GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity 6
GO:0030410 nicotianamine synthase activity 8
GO:0034038 deoxyhypusine synthase activity 2
GO:0044687 geranylfarnesyl diphosphate synthase activity 14
GO:0045547 dehydrodolichyl diphosphate synthase activity 2
GO:0046408 chlorophyll synthetase activity 6
GO:0047293 4-hydroxybenzoate nonaprenyltransferase activity 12
GO:0050267 rubber cis-polyprenylcistransferase activity 20
GO:0050347 trans-octaprenyltranstransferase activity 10
GO:0051996 squalene synthase activity 4
GO:0052381 tRNA dimethylallyltransferase activity 20
GO:0052622 ATP dimethylallyltransferase activity 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001