Functional clusters
Information
- Type Gene Ontology
- Description 3-deoxy-7-phosphoheptulonate synthase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-6 | 3 | CH_aar_216 | 2 | 2 | 0.000273698 |
Brassica carinata | Contig372 | 3 | CH_bca_1008 | 2 | 2 | 0.000961939 |
Carica papaya | supercontig_98 | 3 | CH_cpa_305 | 2 | 2 | 0.000950661 |
Gossypium hirsutum | D05 | 3 | CH_ghi_622 | 2 | 2 | 0.000560733 |
Lupinus albus | Lalb_Chr23 | 3 | CH_lal_56 | 4 | 4 | 0.0000000000303595 |
Magnolia biondii | Chr05 | 3 | CH_mbi_491 | 2 | 2 | 0.000145698 |
Malus domestica | Chr01 | 3 | CH_mdo_254 | 3 | 3 | 0.000000474554 |
Nelumbo nucifera | chr1 | 3 | CH_nnu_297 | 2 | 2 | 0.000481684 |
Rhododendron simsii | chr08 | 3 | CH_rsi_532 | 2 | 2 | 0.000967961 |
Rhododendron simsii | chr05 | 3 | CH_rsi_533 | 2 | 2 | 0.000967961 |
Simmondsia chinensis | GWHAASQ00000026 | 3 | CH_sci_249 | 2 | 2 | 0.000510856 |
Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_217 | 3 | 6 | 0.0000010333 |
Solanum pennellii | Spenn-ch11 | 3 | CH_spe_124 | 3 | 3 | 0.0000000296764 |
Solanum tuberosum | ST4.03ch11 | 3 | CH_stu_534 | 2 | 2 | 0.000307472 |
Trochodendron aralioides | group11 | 3 | CH_tar_461 | 2 | 2 | 0.000600366 |
Utricularia gibba | unitig_747 | 3 | CH_ugi_148 | 2 | 2 | 0.000820479 |
Aethionema arabicum | LG-6 | 4 | CH_aar_216 | 2 | 2 | 0.000273698 |
Brassica carinata | Contig372 | 4 | CH_bca_1008 | 2 | 2 | 0.000961939 |
Carica papaya | supercontig_98 | 4 | CH_cpa_305 | 2 | 2 | 0.000950661 |
Gossypium hirsutum | D05 | 4 | CH_ghi_622 | 2 | 2 | 0.000560733 |
Lupinus albus | Lalb_Chr23 | 4 | CH_lal_56 | 4 | 4 | 0.0000000000303595 |
Magnolia biondii | Chr05 | 4 | CH_mbi_491 | 2 | 2 | 0.000145698 |
Malus domestica | Chr01 | 4 | CH_mdo_254 | 3 | 3 | 0.000000474554 |
Nelumbo nucifera | chr1 | 4 | CH_nnu_297 | 2 | 2 | 0.000481684 |
Rhododendron simsii | chr08 | 4 | CH_rsi_532 | 2 | 2 | 0.000967961 |
Rhododendron simsii | chr05 | 4 | CH_rsi_533 | 2 | 2 | 0.000967961 |
Simmondsia chinensis | GWHAASQ00000026 | 4 | CH_sci_249 | 2 | 2 | 0.000510856 |
Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_217 | 3 | 6 | 0.0000010333 |
Solanum pennellii | Spenn-ch11 | 4 | CH_spe_124 | 3 | 3 | 0.0000000296764 |
Solanum tuberosum | ST4.03ch11 | 4 | CH_stu_534 | 2 | 2 | 0.000307472 |
Trochodendron aralioides | group11 | 4 | CH_tar_461 | 2 | 2 | 0.000600366 |
Utricularia gibba | unitig_747 | 4 | CH_ugi_148 | 2 | 2 | 0.000820479 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |