Functional clusters

Information

  • Type Gene Ontology
  • Description 3-deoxy-7-phosphoheptulonate synthase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 3 CH_aar_216 2 2 0.000273698
Brassica carinata Contig372 3 CH_bca_1008 2 2 0.000961939
Carica papaya supercontig_98 3 CH_cpa_305 2 2 0.000950661
Gossypium hirsutum D05 3 CH_ghi_622 2 2 0.000560733
Lupinus albus Lalb_Chr23 3 CH_lal_56 4 4 0.0000000000303595
Magnolia biondii Chr05 3 CH_mbi_491 2 2 0.000145698
Malus domestica Chr01 3 CH_mdo_254 3 3 0.000000474554
Nelumbo nucifera chr1 3 CH_nnu_297 2 2 0.000481684
Rhododendron simsii chr08 3 CH_rsi_532 2 2 0.000967961
Rhododendron simsii chr05 3 CH_rsi_533 2 2 0.000967961
Simmondsia chinensis GWHAASQ00000026 3 CH_sci_249 2 2 0.000510856
Solanum lycopersicum SL4.0ch01 3 CH_sly_217 3 6 0.0000010333
Solanum pennellii Spenn-ch11 3 CH_spe_124 3 3 0.0000000296764
Solanum tuberosum ST4.03ch11 3 CH_stu_534 2 2 0.000307472
Trochodendron aralioides group11 3 CH_tar_461 2 2 0.000600366
Utricularia gibba unitig_747 3 CH_ugi_148 2 2 0.000820479
Aethionema arabicum LG-6 4 CH_aar_216 2 2 0.000273698
Brassica carinata Contig372 4 CH_bca_1008 2 2 0.000961939
Carica papaya supercontig_98 4 CH_cpa_305 2 2 0.000950661
Gossypium hirsutum D05 4 CH_ghi_622 2 2 0.000560733
Lupinus albus Lalb_Chr23 4 CH_lal_56 4 4 0.0000000000303595
Magnolia biondii Chr05 4 CH_mbi_491 2 2 0.000145698
Malus domestica Chr01 4 CH_mdo_254 3 3 0.000000474554
Nelumbo nucifera chr1 4 CH_nnu_297 2 2 0.000481684
Rhododendron simsii chr08 4 CH_rsi_532 2 2 0.000967961
Rhododendron simsii chr05 4 CH_rsi_533 2 2 0.000967961
Simmondsia chinensis GWHAASQ00000026 4 CH_sci_249 2 2 0.000510856
Solanum lycopersicum SL4.0ch01 4 CH_sly_217 3 6 0.0000010333
Solanum pennellii Spenn-ch11 4 CH_spe_124 3 3 0.0000000296764
Solanum tuberosum ST4.03ch11 4 CH_stu_534 2 2 0.000307472
Trochodendron aralioides group11 4 CH_tar_461 2 2 0.000600366
Utricularia gibba unitig_747 4 CH_ugi_148 2 2 0.000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001