Functional clusters

Information

  • Type Gene Ontology
  • Description rubber cis-polyprenylcistransferase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 3 CH_aly_202 2 2 0.0000660044
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 3 CH_amhyb_142 2 2 0.000252525
Chenopodium quinoa C_Quinoa_Scaffold_1251 3 CH_cqu_127 4 7 0.0000000152368
Glycine max Gm14 3 CH_gma_326 2 2 0.000113867
Helianthus annuus HanXRQChr08 3 CH_han_525 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_5 3 CH_lsa_163 3 5 0.0000000396294
Malus domestica Chr03 3 CH_mdo_401 2 2 0.0000379212
Medicago truncatula chr5 3 CH_mtr_91 4 4 0.000000000000208085
Papaver somniferum NW_020628818.1 3 CH_pso_150 4 5 0.000000000408201
Selaginella moellendorffii scaffold_3 3 CH_smo_47 3 3 0.000000457721
Arabidopsis lyrata scaffold_4 4 CH_aly_202 2 2 0.0000660044
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 4 CH_amhyb_142 2 2 0.000252525
Chenopodium quinoa C_Quinoa_Scaffold_1251 4 CH_cqu_127 4 7 0.0000000152368
Glycine max Gm14 4 CH_gma_326 2 2 0.000113867
Helianthus annuus HanXRQChr08 4 CH_han_525 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_5 4 CH_lsa_163 3 5 0.0000000396294
Malus domestica Chr03 4 CH_mdo_401 2 2 0.0000379212
Medicago truncatula chr5 4 CH_mtr_91 4 4 0.000000000000208085
Papaver somniferum NW_020628818.1 4 CH_pso_150 4 5 0.000000000408201
Selaginella moellendorffii scaffold_3 4 CH_smo_47 3 3 0.000000457721

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001