Functional clusters
Information
- Type Gene Ontology
- Description 3-deoxy-8-phosphooctulonate synthase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 3 | CH_amhyb_36 | 3 | 3 | 0.0000000106286 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 3 | CH_arhy_14 | 11 | 15 | 2.40202e-36 |
| Brassica carinata | ChrC08 | 3 | CH_bca_920 | 2 | 3 | 0.000641272 |
| Durio zibethinus | NW_019167860.1 | 3 | CH_dzi_292 | 2 | 3 | 0.000417124 |
| Lonicera japonica | GWHAAZE00000007 | 3 | CH_lonja_535 | 2 | 3 | 0.00053896 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_345 | 2 | 4 | 0.00045018 |
| Quercus lobata | 4 | 3 | CH_qlo_991 | 3 | 63 | 0.000633404 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 4 | CH_amhyb_36 | 3 | 3 | 0.0000000106286 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 4 | CH_arhy_14 | 11 | 15 | 2.40202e-36 |
| Brassica carinata | ChrC08 | 4 | CH_bca_920 | 2 | 3 | 0.000641272 |
| Durio zibethinus | NW_019167860.1 | 4 | CH_dzi_292 | 2 | 3 | 0.000417124 |
| Lonicera japonica | GWHAAZE00000007 | 4 | CH_lonja_535 | 2 | 3 | 0.00053896 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_345 | 2 | 4 | 0.00045018 |
| Quercus lobata | 4 | 4 | CH_qlo_991 | 3 | 63 | 0.000633404 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |