Functional clusters

Information

  • Type Gene Ontology
  • Description oxidoreductase activity, acting on the CH-CH group of donors

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044371.1 3 CH_cansat_233 5 21 0.0000748259
Coffea canephora chr2 3 CH_ccan_243 3 7 0.0000990433
Carpinus fangiana Cfa04 3 CH_cfa_341 3 3 0.000911973
Citrullus lanatus CG_Chr05 3 CH_cla_146 3 3 0.000468793
Cucumis melo chr10 3 CH_cme_134 4 5 0.00000601526
Cucumis sativus L. chr5 3 CH_csa_245 3 3 0.000415091
Daucus carota DCARv2_Chr2 3 CH_dca_188 4 5 0.00000786326
Eucalyptus grandis Chr07 3 CH_egr_889 3 3 0.000963234
Erythranthe guttata scaffold_6 3 CH_egut_395 3 3 0.000628935
Fragaria vesca Fvb2 3 CH_fve_342 3 3 0.000514173
Lotus japonicus chr2 3 CH_lja_349 3 3 0.000654431
Magnolia biondii Chr11 3 CH_mbi_637 3 3 0.000682567
Rhododendron simsii chr09 3 CH_rsi_147 5 5 0.00000000426682
Sequoiadendron giganteum chr1 3 CH_sgi_829 4 4 0.00000702733
Solanum tuberosum ST4.03ch11 3 CH_stu_605 3 3 0.000676363
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_170 4 5 0.0000138139
Cannabis sativa NC_044371.1 4 CH_cansat_233 5 21 0.0000748259
Coffea canephora chr2 4 CH_ccan_243 3 7 0.0000990433
Carpinus fangiana Cfa04 4 CH_cfa_341 3 3 0.000911973
Citrullus lanatus CG_Chr05 4 CH_cla_146 3 3 0.000468793
Cucumis melo chr10 4 CH_cme_134 4 5 0.00000601526
Cucumis sativus L. chr5 4 CH_csa_245 3 3 0.000415091
Daucus carota DCARv2_Chr2 4 CH_dca_188 4 5 0.00000786326
Eucalyptus grandis Chr07 4 CH_egr_889 3 3 0.000963234
Erythranthe guttata scaffold_6 4 CH_egut_395 3 3 0.000628935
Fragaria vesca Fvb2 4 CH_fve_342 3 3 0.000514173
Lotus japonicus chr2 4 CH_lja_349 3 3 0.000654431
Magnolia biondii Chr11 4 CH_mbi_637 3 3 0.000682567
Rhododendron simsii chr09 4 CH_rsi_147 5 5 0.00000000426682
Sequoiadendron giganteum chr1 4 CH_sgi_829 4 4 0.00000702733
Solanum tuberosum ST4.03ch11 4 CH_stu_605 3 3 0.000676363
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_170 4 5 0.0000138139

Available child term results

Ontology identifier Description Number of clusters
GO:0000104 succinate dehydrogenase activity 2
GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity 28
GO:0003995 acyl-CoA dehydrogenase activity 4
GO:0003997 acyl-CoA oxidase activity 36
GO:0004109 coproporphyrinogen oxidase activity 4
GO:0004152 dihydroorotate dehydrogenase activity 6
GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity 6
GO:0004665 prephenate dehydrogenase (NADP+) activity 4
GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity 8
GO:0008177 succinate dehydrogenase (ubiquinone) activity 2
GO:0008670 2,4-dienoyl-CoA reductase (NADPH) activity 16
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 4
GO:0009918 sterol delta7 reductase activity 2
GO:0010283 pinoresinol reductase activity 30
GO:0016166 phytoene dehydrogenase activity 20
GO:0016401 palmitoyl-CoA oxidase activity 2
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 200
GO:0016629 12-oxophytodienoate reductase activity 96
GO:0016630 protochlorophyllide reductase activity 12
GO:0016633 galactonolactone dehydrogenase activity 4
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 2
GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor 6
GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity 4
GO:0032440 2-alkenal reductase [NAD(P)+] activity 22
GO:0033729 anthocyanidin reductase activity 4
GO:0033730 arogenate dehydrogenase (NADP+) activity 34
GO:0035671 enone reductase activity 70
GO:0035798 2-alkenal reductase (NADP+) activity 6
GO:0047526 2'-hydroxyisoflavone reductase activity 12
GO:0050213 progesterone 5-alpha-reductase activity 2
GO:0050613 delta14-sterol reductase activity 4
GO:0050619 phytochromobilin:ferredoxin oxidoreductase activity 4
GO:0051743 red chlorophyll catabolite reductase activity 36
GO:0080004 thalian-diol desaturase activity 8
GO:0102389 polyprenol reductase activity 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001