Functional clusters

Information

  • Type Gene Ontology
  • Description phytoene dehydrogenase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 3 CH_acertr_215 3 11 0.00000491787
Carya illinoinensis Chr13 3 CH_cil_119 4 5 0.0000000000178604
Daucus carota DCARv2_Chr7 3 CH_dca_306 2 2 0.000191333
Lotus japonicus chr6 3 CH_lja_121 3 6 0.00000061351
Lactuca sativa Lsat_1_v8_lg_1 3 CH_lsa_383 2 3 0.000154202
Oryza sativa ssp. japonica chr08 3 CH_osa_355 2 2 0.000158437
Prunus persica Pp02 3 CH_ppe_457 2 3 0.000671324
Tripterygium wilfordii NC_052234.1 3 CH_twi_282 2 2 0.000334728
Vitis vinifera chr6 3 CH_vvi_136 3 3 0.0000000347148
Zea mays 1 3 CH_zma_270 2 2 0.000306788
Acer truncatum chr3 4 CH_acertr_215 3 11 0.00000491787
Carya illinoinensis Chr13 4 CH_cil_119 4 5 0.0000000000178604
Daucus carota DCARv2_Chr7 4 CH_dca_306 2 2 0.000191333
Lotus japonicus chr6 4 CH_lja_121 3 6 0.00000061351
Lactuca sativa Lsat_1_v8_lg_1 4 CH_lsa_383 2 3 0.000154202
Oryza sativa ssp. japonica chr08 4 CH_osa_355 2 2 0.000158437
Prunus persica Pp02 4 CH_ppe_457 2 3 0.000671324
Tripterygium wilfordii NC_052234.1 4 CH_twi_282 2 2 0.000334728
Vitis vinifera chr6 4 CH_vvi_136 3 3 0.0000000347148
Zea mays 1 4 CH_zma_270 2 2 0.000306788

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001