Functional clusters

Information

  • Type Gene Ontology
  • Description red chlorophyll catabolite reductase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 3 CH_acertr_86 3 3 0.000000007455
Cannabis sativa NC_044377.1 3 CH_cansat_277 2 2 0.000196993
Corylus avellana 11 3 CH_cav_397 2 2 0.000689981
Citrus clementina scaffold_7 3 CH_ccl_309 2 2 0.0000820311
Carpinus fangiana Cfa01 3 CH_cfa_254 2 3 0.000227195
Citrullus lanatus CG_Chr02 3 CH_cla_105 2 2 0.0000887115
Cucumis melo chr11 3 CH_cme_173 2 2 0.0000667111
Cucumis sativus L. chr2 3 CH_csa_188 2 2 0.0000834759
Eutrema salsugineum scaffold_14 3 CH_esa_188 2 2 0.00022845
Helianthus annuus HanXRQChr14 3 CH_han_515 2 3 0.000115926
Hydrangea macrophylla Hma1.2p1_0200F.1 3 CH_hma_43 3 3 0.0000000185113
Marchantia polymorpha scaffold_2 3 CH_mpo_106 2 2 0.000331327
Oryza sativa ssp. japonica chr10 3 CH_osa_117 3 4 0.0000000167348
Populus trichocarpa Chr07 3 CH_ptr_149 3 3 0.00000000501143
Phaseolus vulgaris Chr08 3 CH_pvu_239 2 2 0.0000734727
Quercus lobata 6 3 CH_qlo_710 2 2 0.0000516289
Salix brachista GWHAAZH00000007 3 CH_sbr_240 2 2 0.000063014
Selenicereus undatus Scaffold_33679 3 CH_sun_61 3 15 0.00000360218
Acer truncatum chr3 4 CH_acertr_86 3 3 0.000000007455
Cannabis sativa NC_044377.1 4 CH_cansat_277 2 2 0.000196993
Corylus avellana 11 4 CH_cav_397 2 2 0.000689981
Citrus clementina scaffold_7 4 CH_ccl_309 2 2 0.0000820311
Carpinus fangiana Cfa01 4 CH_cfa_254 2 3 0.000227195
Citrullus lanatus CG_Chr02 4 CH_cla_105 2 2 0.0000887115
Cucumis melo chr11 4 CH_cme_173 2 2 0.0000667111
Cucumis sativus L. chr2 4 CH_csa_188 2 2 0.0000834759
Eutrema salsugineum scaffold_14 4 CH_esa_188 2 2 0.00022845
Helianthus annuus HanXRQChr14 4 CH_han_515 2 3 0.000115926
Hydrangea macrophylla Hma1.2p1_0200F.1 4 CH_hma_43 3 3 0.0000000185113
Marchantia polymorpha scaffold_2 4 CH_mpo_106 2 2 0.000331327
Oryza sativa ssp. japonica chr10 4 CH_osa_117 3 4 0.0000000167348
Populus trichocarpa Chr07 4 CH_ptr_149 3 3 0.00000000501143
Phaseolus vulgaris Chr08 4 CH_pvu_239 2 2 0.0000734727
Quercus lobata 6 4 CH_qlo_710 2 2 0.0000516289
Salix brachista GWHAAZH00000007 4 CH_sbr_240 2 2 0.000063014
Selenicereus undatus Scaffold_33679 4 CH_sun_61 3 15 0.00000360218

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001