Functional clusters
Information
- Type Gene Ontology
- Description acyl-CoA oxidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_365 | 2 | 2 | 0.000990066 |
| Brassica carinata | ChrB02 | 3 | CH_bca_144 | 5 | 22 | 0.00000000585405 |
| Brassica carinata | ChrC05 | 3 | CH_bca_16 | 7 | 12 | 1.21032e-17 |
| Brassica napus | A10 | 3 | CH_bna_257 | 3 | 4 | 0.00000168667 |
| Cicer arietinum L. | Ca_LG7_v3 | 3 | CH_car_211 | 2 | 2 | 0.000778301 |
| Chara braunii | BFEA01000171 | 3 | CH_cbr_160 | 2 | 2 | 0.000431562 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3416 | 3 | CH_cqu_177 | 3 | 3 | 0.000000404122 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_479 | 2 | 2 | 0.000942317 |
| Fragaria x ananassa | Fvb5-1 | 3 | CH_fan_120 | 4 | 11 | 0.0000000242904 |
| Lupinus albus | Lalb_Chr05 | 3 | CH_lal_172 | 3 | 4 | 0.00000363517 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_191 | 3 | 3 | 0.00000013871 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_406 | 4 | 4 | 0.000000000347199 |
| Sapria himalayana | scaffold9_16683904 | 3 | CH_shi_32 | 4 | 9 | 0.000000000353289 |
| Solanum lycopersicum | SL4.0ch08 | 3 | CH_sly_576 | 2 | 2 | 0.000880411 |
| Solanum pennellii | Spenn-ch08 | 3 | CH_spe_440 | 2 | 2 | 0.000667186 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 3 | CH_tpr_100 | 3 | 3 | 0.000000300841 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_389 | 2 | 2 | 0.000929238 |
| Vigna mungo | CM024076.1 | 3 | CH_vmu_48 | 4 | 7 | 0.00000000198214 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_365 | 2 | 2 | 0.000990066 |
| Brassica carinata | ChrB02 | 4 | CH_bca_144 | 5 | 22 | 0.00000000585405 |
| Brassica carinata | ChrC05 | 4 | CH_bca_16 | 7 | 12 | 1.21032e-17 |
| Brassica napus | A10 | 4 | CH_bna_257 | 3 | 4 | 0.00000168667 |
| Cicer arietinum L. | Ca_LG7_v3 | 4 | CH_car_211 | 2 | 2 | 0.000778301 |
| Chara braunii | BFEA01000171 | 4 | CH_cbr_160 | 2 | 2 | 0.000431562 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3416 | 4 | CH_cqu_177 | 3 | 3 | 0.000000404122 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_479 | 2 | 2 | 0.000942317 |
| Fragaria x ananassa | Fvb5-1 | 4 | CH_fan_120 | 4 | 11 | 0.0000000242904 |
| Lupinus albus | Lalb_Chr05 | 4 | CH_lal_172 | 3 | 4 | 0.00000363517 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_191 | 3 | 3 | 0.00000013871 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_406 | 4 | 4 | 0.000000000347199 |
| Sapria himalayana | scaffold9_16683904 | 4 | CH_shi_32 | 4 | 9 | 0.000000000353289 |
| Solanum lycopersicum | SL4.0ch08 | 4 | CH_sly_576 | 2 | 2 | 0.000880411 |
| Solanum pennellii | Spenn-ch08 | 4 | CH_spe_440 | 2 | 2 | 0.000667186 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 4 | CH_tpr_100 | 3 | 3 | 0.000000300841 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_389 | 2 | 2 | 0.000929238 |
| Vigna mungo | CM024076.1 | 4 | CH_vmu_48 | 4 | 7 | 0.00000000198214 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0016401 | palmitoyl-CoA oxidase activity | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |