Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.light

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cucumis melo chr03 1 CH_cme_292 3 4 0.000661478
Cucumis melo chr03 2 CH_cme_292 3 4 0.000661478

Available child term results

Ontology identifier Description Number of clusters
26.1.1.1 External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY) 12
26.1.1.2 External stimuli response.light.red/far red light.PHY-A translocation regulator (FHY1/FHL) 3
26.1.1.3.2 External stimuli response.light.red/far red light.substrate adaptor module of CUL4-DDB1 ubiquitin ligase complex.regulator component SPA 2
26.1.1.4 External stimuli response.light.red/far red light.substrate adaptor of phytochrome signalling SCF ubiquitin ligase (EID1) 2
26.1.1.5 External stimuli response.light.red/far red light.substrate adaptor of phytochrome signalling SCF ubiquitin ligase (AFR) 4
26.1.1.6 External stimuli response.light.red/far red light.transcriptional regulator (FRS) 22
26.1.1.7 External stimuli response.light.red/far red light.transcriptional regulator (PIF) 2
26.1.1.8.1 External stimuli response.light.red/far red light.phytochrome-mediated agravitropism.regulator (GIL1) 12
26.1.2.1.1 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.cryptochrome photoreceptor (CRY) 12
26.1.2.1.2 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB) 6
26.1.2.1.3 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.cryptochrome-signalling inhibitor (BIC) 14
26.1.2.2 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception 2
26.1.2.2.1 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin photoreceptor 4
26.1.2.2.2 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.regulator kinase (BLUS) 4
26.1.2.2.3 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin signalling factor (PKS) 14
26.1.2.2.4 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin signalling factor (RPT2) 4
26.1.2.3.1 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.substrate adaptor of SCF E3 ubiquitin ligase complex (ADO) 16
26.1.2.3.2 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.regulator protein (GIGANTEA) 8
26.1.2.4.1 External stimuli response.light.UV-A/blue light.PLP-mediated photoperception.photoreceptor (PLP) 2
26.1.3.1 External stimuli response.light.UV-B light.photoreceptor (UVR8) 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001