Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 1 CH_acertr_221 3 6 0.0000178802
Acer truncatum chr10 1 CH_acertr_96 4 8 0.0000000154398
Amborella trichopoda AmTr_v1.0_scaffold00047 1 CH_atr_307 2 2 0.000476644
Lonicera japonica GWHAAZE00000003 1 CH_lonja_615 2 2 0.000598874
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_504 2 2 0.000514007
Sequoiadendron giganteum chr6 1 CH_sgi_1329 2 4 0.000487151
Acer truncatum chr12 2 CH_acertr_221 3 6 0.0000178802
Acer truncatum chr10 2 CH_acertr_96 4 8 0.0000000154398
Amborella trichopoda AmTr_v1.0_scaffold00047 2 CH_atr_307 2 2 0.000476644
Lonicera japonica GWHAAZE00000003 2 CH_lonja_615 2 2 0.000598874
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_504 2 2 0.000514007
Sequoiadendron giganteum chr6 2 CH_sgi_1329 2 4 0.000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001