Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.light.red/far red light.transcriptional regulator (FRS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carya illinoinensis Chr03 1 CH_cil_438 2 2 0.000185948
Citrullus lanatus CG_Chr07 1 CH_cla_135 2 2 0.0000887115
Cucumis sativus L. chr4 1 CH_csa_218 2 2 0.0000834759
Fragaria vesca Fvb6 1 CH_fve_279 2 2 0.0000589102
Malus domestica Chr09 1 CH_mdo_495 2 2 0.000113763
Prunus persica Pp03 1 CH_ppe_349 2 2 0.0000745962
Populus trichocarpa Chr06 1 CH_ptr_393 2 2 0.0001734
Quercus lobata 4 1 CH_qlo_686 2 2 0.0000516289
Salix brachista GWHAAZH00000006 1 CH_sbr_300 2 2 0.000189042
Sechium edule LG13 1 CH_sed_210 2 2 0.0000713419
Tarenaya hassleriana NW_010964923.1 1 CH_tha_152 2 2 0.000209541
Carya illinoinensis Chr03 2 CH_cil_438 2 2 0.000185948
Citrullus lanatus CG_Chr07 2 CH_cla_135 2 2 0.0000887115
Cucumis sativus L. chr4 2 CH_csa_218 2 2 0.0000834759
Fragaria vesca Fvb6 2 CH_fve_279 2 2 0.0000589102
Malus domestica Chr09 2 CH_mdo_495 2 2 0.000113763
Prunus persica Pp03 2 CH_ppe_349 2 2 0.0000745962
Populus trichocarpa Chr06 2 CH_ptr_393 2 2 0.0001734
Quercus lobata 4 2 CH_qlo_686 2 2 0.0000516289
Salix brachista GWHAAZH00000006 2 CH_sbr_300 2 2 0.000189042
Sechium edule LG13 2 CH_sed_210 2 2 0.0000713419
Tarenaya hassleriana NW_010964923.1 2 CH_tha_152 2 2 0.000209541

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001