Functional clusters
Information
- Type MapMan
- Description External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.cryptochrome-signalling inhibitor (BIC)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Lonicera japonica | GWHAAZE00000002 | 1 | CH_lonja_466 | 2 | 2 | 0.000179662 |
Physcomitrium patens | Chr03 | 1 | CH_ppa_164 | 2 | 2 | 0.000183818 |
Populus trichocarpa | Chr04 | 1 | CH_ptr_437 | 2 | 2 | 0.000346801 |
Populus trichocarpa | Chr09 | 1 | CH_ptr_438 | 2 | 2 | 0.000346801 |
Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_414 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch11 | 1 | CH_spe_361 | 2 | 2 | 0.000133437 |
Solanum tuberosum | ST4.03ch11 | 1 | CH_stu_465 | 2 | 2 | 0.000153736 |
Lonicera japonica | GWHAAZE00000002 | 2 | CH_lonja_466 | 2 | 2 | 0.000179662 |
Physcomitrium patens | Chr03 | 2 | CH_ppa_164 | 2 | 2 | 0.000183818 |
Populus trichocarpa | Chr04 | 2 | CH_ptr_437 | 2 | 2 | 0.000346801 |
Populus trichocarpa | Chr09 | 2 | CH_ptr_438 | 2 | 2 | 0.000346801 |
Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_414 | 2 | 2 | 0.000176082 |
Solanum pennellii | Spenn-ch11 | 2 | CH_spe_361 | 2 | 2 | 0.000133437 |
Solanum tuberosum | ST4.03ch11 | 2 | CH_stu_465 | 2 | 2 | 0.000153736 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |