Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.cryptochrome photoreceptor (CRY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Lonicera japonica GWHAAZE00000008 1 CH_lonja_637 2 2 0.000898311
Malus domestica Chr16 1 CH_mdo_682 2 2 0.000568817
Physcomitrium patens Chr07 1 CH_ppa_163 2 2 0.000183818
Sequoiadendron giganteum chr8 1 CH_sgi_1312 2 2 0.000487151
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_425 2 2 0.000929238
Vanilla planifolia CM028154.1 1 CH_vpl_86 3 8 0.00000458398
Lonicera japonica GWHAAZE00000008 2 CH_lonja_637 2 2 0.000898311
Malus domestica Chr16 2 CH_mdo_682 2 2 0.000568817
Physcomitrium patens Chr07 2 CH_ppa_163 2 2 0.000183818
Sequoiadendron giganteum chr8 2 CH_sgi_1312 2 2 0.000487151
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_425 2 2 0.000929238
Vanilla planifolia CM028154.1 2 CH_vpl_86 3 8 0.00000458398

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001