Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.substrate adaptor of SCF E3 ubiquitin ligase complex (ADO)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB03 1 CH_bca_162 3 3 0.00000000685435
Brassica napus A07 1 CH_bna_148 3 3 0.0000000103248
Brassica napus C07 1 CH_bna_266 3 9 0.00000086713
Brassica oleracea C7 1 CH_bol_110 3 10 0.00000019229
Brassica rapa A07 1 CH_bra_197 2 2 0.0000429314
Olea europaea chr8 1 CH_oeu_379 2 2 0.000533789
Phaseolus vulgaris Chr09 1 CH_pvu_354 2 2 0.000220418
Utricularia gibba unitig_748 1 CH_ugi_23 3 3 0.0000000809468
Utricularia gibba unitig_22 1 CH_ugi_290 2 2 0.000734592
Brassica carinata ChrB03 2 CH_bca_162 3 3 0.00000000685435
Brassica oleracea C7 2 CH_bol_110 3 10 0.00000019229
Brassica rapa A07 2 CH_bra_197 2 2 0.0000429314
Olea europaea chr8 2 CH_oeu_379 2 2 0.000533789
Phaseolus vulgaris Chr09 2 CH_pvu_354 2 2 0.000220418
Utricularia gibba unitig_748 2 CH_ugi_23 3 3 0.0000000809468
Utricularia gibba unitig_22 2 CH_ugi_290 2 2 0.000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001