Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p48840 Brassica napus
A04p07050 Brassica napus
A04p27470 Brassica napus
A08p00120 Brassica napus
Aa31LG10G7450 Aethionema arabicum
Actinidia03874 Actinidia chinensis
Actinidia03982 Actinidia chinensis
Actinidia37757 Actinidia chinensis
Ah.02g115740 Amaranthus hybridus
AL5G33040 Arabidopsis lyrata
Aqoxy7G02440 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EP3JHE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TII4IQ Arachis hypogaea
AT3G52380 Arabidopsis thaliana
ATR0751G161 Amborella trichopoda
Atru.chr8.1329 Acer truncatum
AUR62030720 Chenopodium quinoa
AUR62036352 Chenopodium quinoa
BcaB02g08574 Brassica carinata
BcaC02g09262 Brassica carinata
BcaC06g32908 Brassica carinata
BcaC06g33385 Brassica carinata
BolC4t25645H Brassica oleracea
BolC6t37481H Brassica oleracea
BolC7t45209H Brassica oleracea
BraA02t06251Z Brassica rapa
BraA03t13985Z Brassica rapa
BraA04t16402Z Brassica rapa
BraA07t29951Z Brassica rapa
BraA08t32069Z Brassica rapa
C04p40640 Brassica napus
C07p46930 Brassica napus
CANSAT64G2073 Cannabis sativa
CARHR162150 Cardamine hirsuta
Carub.0005s1874 Capsella rubella
Ca_09064_v3 Cicer arietinum L.
Cc06_g06700 Coffea canephora
CDE06G1735 Ceratophyllum demersum
CDE07G1073 Ceratophyllum demersum
Cfa020050 Carpinus fangiana
Ciclev10012204m.g Citrus clementina
CiPaw.10G018900 Carya illinoinensis
ClCG10G018230 Citrullus lanatus
COL.COLO4_29541 Corchorus olitorius
Cpa.g.sc104.10 Carica papaya
CsaV3_3G038090 Cucumis sativus L.
CSS0007860 Camellia sinensis var. sinensis
DCAR_013445 Daucus carota
Dinv12350 Davidia involucrata
Duzib093G2001 Durio zibethinus
EL10Ac5g11854 Beta vulgaris
Eucgr.A02571 Eucalyptus grandis
FAN02G2174 Fragaria x ananassa
FAN05G1339 Fragaria x ananassa
FAN05G2515 Fragaria x ananassa
FAN14G3408 Fragaria x ananassa
FvH4_6g20490 Fragaria vesca
Glyma.03G202900 Glycine max
Glyma.10G082600 Glycine max
Glyma.19G200700 Glycine max
Gohir.A04G055200 Gossypium hirsutum
Gohir.D04G092400 Gossypium hirsutum
Gorai.009G394200 Gossypium raimondii
GSVIVG01022600001 Vitis vinifera
HanXRQChr13g0398501 Helianthus annuus
Haze_20149 Corylus avellana
Haze_20154 Corylus avellana
Hma1.2p1_0079F.1_g041710 Hydrangea macrophylla
HPP92_015641 Vanilla planifolia
HPP92_018626 Vanilla planifolia
Hund10853 Selenicereus undatus
Hund14970 Selenicereus undatus
Lalb_Chr25g0287941 Lupinus albus
Lj1g0002229 Lotus japonicus
Lj2A411G28 Lonicera japonica
Lj5g0007774 Lotus japonicus
Lsat_1_v5_gn_4_19501 Lactuca sativa
Lsat_1_v5_gn_6_34901 Lactuca sativa
Manes.08G034600 Manihot esculenta
Manes.09G044400 Manihot esculenta
MBI12_g38625_MAGBIO Magnolia biondii
MD12G1042000 Malus domestica
MD14G1041200 Malus domestica
Medtr1g056520 Medicago truncatula
Medtr7g106440 Medicago truncatula
MELO3C009550.2 Cucumis melo
Migut.J00689 Erythranthe guttata
MSTRG.19300 Avicennia marina
Nitab4.5_0000220g0170 Nicotiana tabacum
Nitab4.5_0005939g0030 Nicotiana tabacum
Nn6g34639 Nelumbo nucifera
Oeu035637.1 Olea europaea
Os07g0158300 Oryza sativa ssp. japonica
Peaxi162Scf00582g00611 Petunia axillaris
PGR004G2593 Punica granatum
PGSC0003DMG400021364 Solanum tuberosum
Phvul.001G196700 Phaseolus vulgaris
Potri.006G202000 Populus trichocarpa
Potri.016G068300 Populus trichocarpa
Prupe.7G093200 Prunus persica
Psat3g028520 Pisum sativum
Psat3g205760 Pisum sativum
Psat6g108280 Pisum sativum
PSO339G5479 Papaver somniferum
PSO384G1873 Papaver somniferum
QL03p043845 Quercus lobata
QL07p027481 Quercus lobata
RcHm_v2.0_Chr3g0476371 Rosa chinensis
Rhsim03G0063700 Rhododendron simsii
Sabra16G0069300 Salix brachista
Sc01g0005440 Simmondsia chinensis
Sed0015179 Sechium edule
SGA_v2.0_scaffold13G06657 Striga asiatica
Solyc01g006940.4 Solanum lycopersicum
Sopen01g002930 Solanum pennellii
Sp5g09910 Schrenkiella parvula
TAR633G0864 Trochodendron aralioides
THA.LOC104815193 Tarenaya hassleriana
Thecc.05G106500 Theobroma cacao
Thhalv10010548m.g Eutrema salsugineum
TPR.G25330 Trifolium pratense
TPR.G31290 Trifolium pratense
TWI74G1099 Tripterygium wilfordii
unitig_749.g14204 Utricularia gibba
vmacro07487 Vaccinium macrocarpon
VMungo0720G1274 Vigna mungo
VMungo1383G1599 Vigna mungo
Zm00001eb300260 Zea mays

User provided reference genes

Program Settings