Gene: Sp5g09910

General Information

Structural Information

Species Schrenkiella parvula
Gene Identifier Sp5g09910
Transcript Identifier Sp5g09910.1
Gene Type Coding gene
Location ch5-1 : 3700749-3701980 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000142
#Genes/#Species 2580/100
Phylogenetic origin

ID ORTHO05D007638
#Genes/#Species 128/87
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Sp5g09910.v2.2
pacid 45076259

Descriptions

Short descriptions
Ortholog descriptions

Description KOG0131 - Splicing factor 3b, subunit 4

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1901259	ISO	PLAZA Integrative Orthology	chloroplast rRNA processing	AT3G52380
GO:0031425	ISO	PLAZA Integrative Orthology	chloroplast RNA processing	AT3G52380

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	ISO	PLAZA Integrative Orthology	RNA binding	AT3G52380
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT3G52380

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT3G52380
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT3G52380
GO:0009579	ISO	PLAZA Integrative Orthology	thylakoid	AT3G52380

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain

Mapman id	Description
16.11.2.3	RNA processing.organelle machinery.plastidial mRNA stabilisation.ribonucleoprotein (CP33a)