Gene: Solyc01g006940.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g006940.4
  • Transcript Identifier Solyc01g006940.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 1519412-1522057 : positive

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g006940.4.1
  • uniprot A0A3Q7E8H4
  • gene_id Solyc01g006940

Descriptions

  • Description RNA-binding protein CP33, chloroplastic (AHRD V3.3 *-* A0A1J3GQ27_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901259
ISO
PLAZA Integrative Orthologychloroplast rRNA processing AT3G52380
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT3G52380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G52380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G52380
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G52380
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G52380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR003954 RNA recognition motif domain, eukaryote
Mapman id Description
16.11.2.3 RNA processing.organelle machinery.plastidial mRNA stabilisation.ribonucleoprotein (CP33a)