Gene: Nitab4.5_0000220g0170

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000220g0170
  • Transcript Identifier Nitab4.5_0000220g0170.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000220 : 1303938-1307053 : positive

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000220g0170.1
  • SR1-identifier Nta02g04510.1

Descriptions

  • Description RNA recognition motif domain, Nucleotide-binding, alpha-beta plait
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901259
ISO
PLAZA Integrative Orthologychloroplast rRNA processing AT3G52380
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT3G52380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT3G52380
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G52380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G52380
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G52380
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G52380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.11.2.3 RNA processing.organelle machinery.plastidial mRNA stabilisation.ribonucleoprotein (CP33a)