Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14360 Brassica napus
A07p20710 Brassica napus
Aa31LG9G660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.355 Anthoceros agrestis
Actinidia02016 Actinidia chinensis
Actinidia14552 Actinidia chinensis
AL7G48240 Arabidopsis lyrata
Aqoxy5G04278 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BGY2GF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MF5MQE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NB74KP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4HLQF Arachis hypogaea
AT5G41190 Arabidopsis thaliana
ATR0064G111 Amborella trichopoda
Atru.chr9.2220 Acer truncatum
AUR62010616 Chenopodium quinoa
AUR62017259 Chenopodium quinoa
BcaB02g07904 Brassica carinata
BcaB06g27604 Brassica carinata
BcaC02g08976 Brassica carinata
BcaC04g18687 Brassica carinata
BcaC08g44514 Brassica carinata
BcaC08g44516 Brassica carinata
BcaC08g44517 Brassica carinata
BolC4t26422H Brassica oleracea
BolC6t37157H Brassica oleracea
BolC6t37158H Brassica oleracea
BolC9t58686H Brassica oleracea
BraA04t17085Z Brassica rapa
BraA07t29762Z Brassica rapa
C04p48290 Brassica napus
C06p19650 Brassica napus
C06p19660 Brassica napus
CAN.G792.84 Capsicum annuum
CANSAT78G0227 Cannabis sativa
CARHR213190 Cardamine hirsuta
Carub.0004s0410 Capsella rubella
Carub.0007s3429 Capsella rubella
Ca_17544_v3 Cicer arietinum L.
CBR_g50931 Chara braunii
Cc08_g14490 Coffea canephora
CDE05G1698 Ceratophyllum demersum
CDE06G0591 Ceratophyllum demersum
Cfa012156 Carpinus fangiana
Ciclev10019281m.g Citrus clementina
CiPaw.11G137400 Carya illinoinensis
ClCG01G002860 Citrullus lanatus
COL.COLO4_34438 Corchorus olitorius
Cpa.g.sc202.13 Carica papaya
Cre01.g031750 Chlamydomonas reinhardtii
CsaV3_5G002950 Cucumis sativus L.
CSS0019840 Camellia sinensis var. sinensis
DCAR_000603 Daucus carota
Dinv37657 Davidia involucrata
Dinv37658 Davidia involucrata
Dinv38955 Davidia involucrata
Duzib084G1397 Durio zibethinus
ECA240G4094 Erigeron canadensis
EL10Ac1g00317 Beta vulgaris
EL10Ac5g10794 Beta vulgaris
EL10Ac5g12781 Beta vulgaris
Eucgr.E00572 Eucalyptus grandis
FAN04G0694 Fragaria x ananassa
FAN08G3353 Fragaria x ananassa
FAN13G3179 Fragaria x ananassa
FAN18G0535 Fragaria x ananassa
FAN18G1690 Fragaria x ananassa
FAN26G1714 Fragaria x ananassa
FAN28G2416 Fragaria x ananassa
FvH4_5g23090 Fragaria vesca
Glyma.05G206400 Glycine max
Glyma.08G013300 Glycine max
Gohir.A09G192700 Gossypium hirsutum
Gohir.D09G186900 Gossypium hirsutum
Gorai.006G209700 Gossypium raimondii
GSVIVG01019776001 Vitis vinifera
HanXRQChr13g0416481 Helianthus annuus
Haze_08871 Corylus avellana
Hma1.2p1_0377F.1_g139240 Hydrangea macrophylla
HPP92_020857 Vanilla planifolia
Hund11485 Selenicereus undatus
Lalb_Chr05g0224871 Lupinus albus
Lj2C188G12 Lonicera japonica
Lj2C188G13 Lonicera japonica
Lj4g0017456 Lotus japonicus
Lj6A677T80 Lonicera japonica
Lsat_1_v5_gn_6_87181 Lactuca sativa
Manes.01G063000 Manihot esculenta
Mapoly0033s0014 Marchantia polymorpha
MBI18_g19087_MAGBIO Magnolia biondii
MCO14G249 Micromonas commoda
MD14G1101800 Malus domestica
Medtr8g098490 Medicago truncatula
MELO3C005661.2 Cucumis melo
Migut.A00784 Erythranthe guttata
MSTRG.13840 Avicennia marina
Nitab4.5_0003907g0020 Nicotiana tabacum
Nitab4.5_0004836g0050 Nicotiana tabacum
Nn1g02763 Nelumbo nucifera
Nn5g27546 Nelumbo nucifera
Oeu011058.1 Olea europaea
Os02g0114700 Oryza sativa ssp. japonica
Peaxi162Scf00102g01512 Petunia axillaris
PGR042G2640 Punica granatum
PGSC0003DMG400005819 Solanum tuberosum
PGSC0003DMG400029793 Solanum tuberosum
Phvul.002G288000 Phaseolus vulgaris
Potri.003G124700 Populus trichocarpa
Pp3c2_34320 Physcomitrium patens
PRCOL_00006831 Prasinoderma coloniale
Prupe.5G097400 Prunus persica
Psat7g034520 Pisum sativum
PSO017G3139 Papaver somniferum
PSO170G0760 Papaver somniferum
PSO339G4625 Papaver somniferum
PSO384G0809 Papaver somniferum
QL01p003129 Quercus lobata
QL12p018319 Quercus lobata
RcHm_v2.0_Chr2g0099081 Rosa chinensis
RcHm_v2.0_Chr7g0179141 Rosa chinensis
RcHm_v2.0_Chr7g0211871 Rosa chinensis
RcHm_v2.0_Chr7g0211921 Rosa chinensis
RcHm_v2.0_Chr7g0211961 Rosa chinensis
Sabra03G0088200 Salix brachista
SalBow6G1328 Salvia bowleyana
Sc01g0009470 Simmondsia chinensis
Sed0015372 Sechium edule
Sed0018462 Sechium edule
SEGI_23350 Sequoiadendron giganteum
SGA_v2.0_scaffold146G36254 Striga asiatica
SMO171G0086 Selaginella moellendorffii
Solyc08g007990.3 Solanum lycopersicum
Sopen08g003860 Solanum pennellii
Sp7g00720 Schrenkiella parvula
SpUn0010_0200 Schrenkiella parvula
TAR629G3080 Trochodendron aralioides
TAR636G1354 Trochodendron aralioides
THA.LOC104818064 Tarenaya hassleriana
Thecc.03G276500 Theobroma cacao
Thhalv10009994m.g Eutrema salsugineum
Thhalv10027696m.g Eutrema salsugineum
TPR.G12861 Trifolium pratense
TWI81G1014 Tripterygium wilfordii
unitig_37.g12250 Utricularia gibba
vmacro11312 Vaccinium macrocarpon
VMungo0251G2718 Vigna mungo
VMungo1127G2192 Vigna mungo
Zm00001eb026410 Zea mays
Zm00001eb209610 Zea mays
Zm00001eb229850 Zea mays

User provided reference genes

Program Settings