Gene: Potri.003G124700

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.003G124700
  • Transcript Identifier Potri.003G124700.1
  • Gene Type Coding gene
  • Location Chr03 : 14470577-14473402 : positive

Gene Family Information

  • ID HOM05D004635
  • #Genes/#Species 157/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.003G124700.v4.1
  • pacid 42785182
  • synonym estExt_fgenesh4_pm.C_LG_III0392

Descriptions

  • Description K11883 - RNA-binding protein NOB1 (NOB1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000469
IEA
InterProcleavage involved in rRNA processing
GO:0042274
IEA
InterProribosomal small subunit biogenesis
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G41190
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT5G41190
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G41190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004521
IEA
InterProendoribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G41190
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G41190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033411 Ribonuclease, PIN domain
IPR017117 Ribonuclease Nob1, eukaryote
IPR014881 Nin one binding (NOB1) Zn-ribbon-like
IPR039907 RNA-binding protein NOB1
IPR036283 NOB1 zinc finger-like superfamily
Mapman id Description
17.1.1.8.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.pre-rRNA processing endonuclease (NOB1)