Gene: Zm00001eb229850

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb229850
  • Transcript Identifier Zm00001eb229850_T002
  • Gene Type Coding gene
  • Location 5 : 71280682-71282931 : positive

Gene Family Information

  • ID HOM05D004635
  • #Genes/#Species 157/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb229850_T002
  • pid Zm00001eb229850_P002
  • uniprot B6THD0
  • uniprot A0A3L6ELS8
  • uniprot C0PLJ1
  • entrez 100276745
  • refseq NP_001143933.1
  • refseq NM_001150461.2
  • V4_identifier Zm00001d014988

Descriptions

  • Description Zm00001e013450
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G41190
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT5G41190
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G41190
GO:0042274
IEA
GOA Databaseribosomal small subunit biogenesis
GO:0042274
IEA
InterProribosomal small subunit biogenesis
GO:0000469
IEA
GOA Databasecleavage involved in rRNA processing
GO:0000469
IEA
InterProcleavage involved in rRNA processing
GO:0030490
IBA
GOA Databasematuration of SSU-rRNA
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004521
IBA
IEA
GOA Databaseendoribonuclease activity
GO:0004521
IEA
InterProendoribonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G41190
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G41190
GO:0030688
IBA
GOA Databasepreribosome, small subunit precursor
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036283 NOB1 zinc finger-like superfamily
IPR039907 RNA-binding protein NOB1
IPR014881 Nin one binding (NOB1) Zn-ribbon-like
IPR033411 Ribonuclease, PIN domain
IPR017117 Ribonuclease Nob1, eukaryote
Mapman id Description
17.1.1.8.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.pre-rRNA processing endonuclease (NOB1)