Gene: Nitab4.5_0004836g0050

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0004836g0050
  • Transcript Identifier Nitab4.5_0004836g0050.1
  • Gene Type Coding gene
  • Location Nitab4.5_0004836 : 151379-154975 : negative

Gene Family Information

  • ID HOM05D004635
  • #Genes/#Species 157/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0004836g0050.1
  • SR1-identifier Nta23g00750.1

Descriptions

  • Description Nin one binding (NOB1) Zn-ribbon-like, D-site 20S pre-rRNA nuclease
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042274
ISO
PLAZA Homology (enrichment)ribosomal small subunit biogenesis HOM05D004635
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G41190
GO:0000469
ISO
PLAZA Integrative Orthologycleavage involved in rRNA processing AT5G41190
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT5G41190
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G41190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT5G41190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G41190
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G41190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033411 Ribonuclease, PIN domain
IPR036283 NOB1 zinc finger-like superfamily
IPR014881 Nin one binding (NOB1) Zn-ribbon-like
IPR039907 RNA-binding protein NOB1
Mapman id Description
17.1.1.8.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.pre-rRNA processing endonuclease (NOB1)