Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33780 Brassica napus
A04p15620 Brassica napus
Aa31LG5G15080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3939 Anthoceros agrestis
Actinidia06070 Actinidia chinensis
Actinidia23573 Actinidia chinensis
Actinidia27487 Actinidia chinensis
AL3G14740 Arabidopsis lyrata
AL7G50210 Arabidopsis lyrata
Aqoxy3G03268 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.31SG4H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9G88ZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C6A6VI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJC8LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NNND2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PC3EEW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QUI3Q9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1RF4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TUDV7U Arachis hypogaea
AT3G04680 Arabidopsis thaliana
AT5G39930 Arabidopsis thaliana
ATR0051G026 Amborella trichopoda
Atru.chr8.1914 Acer truncatum
AUR62010753 Chenopodium quinoa
AUR62031643 Chenopodium quinoa
AUR62038875 Chenopodium quinoa
BcaB04g19307 Brassica carinata
BcaB06g27742 Brassica carinata
BcaB07g33761 Brassica carinata
BcaC01g04355 Brassica carinata
BcaC02g08842 Brassica carinata
BcaC08g43036 Brassica carinata
BolC3t16397H Brassica oleracea
BolC4t26581H Brassica oleracea
BolC6t35419H Brassica oleracea
BraA03t12552Z Brassica rapa
BraA04t17197Z Brassica rapa
C03p41080 Brassica napus
C04p49900 Brassica napus
C06p02960 Brassica napus
CAN.G226.26 Capsicum annuum
CAN.G742.26 Capsicum annuum
CARHR078910 Cardamine hirsuta
CARHR262250 Cardamine hirsuta
Carub.0003s0384 Capsella rubella
Carub.0007s3580 Capsella rubella
Ca_11340_v3 Cicer arietinum L.
CBR_g42172 Chara braunii
Cc08_g10980 Coffea canephora
CDE04G0248 Ceratophyllum demersum
Cfa007509 Carpinus fangiana
Cfa007708 Carpinus fangiana
Ciclev10011737m.g Citrus clementina
CiPaw.03G030200 Carya illinoinensis
CiPaw.04G020200 Carya illinoinensis
ClCG09G018400 Citrullus lanatus
COL.COLO4_25181 Corchorus olitorius
Cpa.g.c42185 Carica papaya
Cpa.g.sc14.41 Carica papaya
Cre03.g194800 Chlamydomonas reinhardtii
CsaV3_5G037880 Cucumis sativus L.
CSS0008092 Camellia sinensis var. sinensis
CSS0012548 Camellia sinensis var. sinensis
CSS0019571 Camellia sinensis var. sinensis
CSS0037061 Camellia sinensis var. sinensis
DCAR_021672 Daucus carota
Dinv06512 Davidia involucrata
Dinv07025 Davidia involucrata
Duzib147G0459 Durio zibethinus
ECA232G3358 Erigeron canadensis
EL10Ac2g02933 Beta vulgaris
Eucgr.I01917 Eucalyptus grandis
FAN02G4162 Fragaria x ananassa
FAN05G4948 Fragaria x ananassa
FAN09G4881 Fragaria x ananassa
FAN14G2223 Fragaria x ananassa
FvH4_6g49260 Fragaria vesca
Glyma.10G292700 Glycine max
Glyma.20G242900 Glycine max
Gohir.A05G364100 Gossypium hirsutum
Gohir.D04G050600 Gossypium hirsutum
Gorai.012G056100 Gossypium raimondii
GSVIVG01032607001 Vitis vinifera
HanXRQChr09g0265571 Helianthus annuus
HanXRQChr12g0357441 Helianthus annuus
Haze_14584 Corylus avellana
HPP92_009728 Vanilla planifolia
HPP92_012836 Vanilla planifolia
Hund13244 Selenicereus undatus
Lalb_Chr21g0307111 Lupinus albus
Lj7A401T78 Lonicera japonica
Lsat_1_v5_gn_4_176840 Lactuca sativa
Manes.17G021000 Manihot esculenta
Mapoly0016s0080 Marchantia polymorpha
MCO09G184 Micromonas commoda
MD09G1046100 Malus domestica
MD09G1046200 Malus domestica
MD09G1046500 Malus domestica
MD17G1047000 Malus domestica
Medtr1g116060 Medicago truncatula
MELO3C021974.2 Cucumis melo
Migut.E01591 Erythranthe guttata
MSTRG.1703 Avicennia marina
Nitab4.5_0000157g0090 Nicotiana tabacum
Nitab4.5_0001504g0050 Nicotiana tabacum
Nn3g17130 Nelumbo nucifera
Nn4g23045 Nelumbo nucifera
Oeu018626.2 Olea europaea
Os02g0217500 Oryza sativa ssp. japonica
Peaxi162Scf00345g00811 Petunia axillaris
PGR142G2860 Punica granatum
PGR142G4111 Punica granatum
PGSC0003DMG400030284 Solanum tuberosum
Phvul.007G007300 Phaseolus vulgaris
Potri.017G077200 Populus trichocarpa
Pp3c21_6910 Physcomitrium patens
PRCOL_00003252 Prasinoderma coloniale
Prupe.3G272100 Prunus persica
Psat6g239400 Pisum sativum
PSO017G3834 Papaver somniferum
PSO478G0915 Papaver somniferum
PSO591G0197 Papaver somniferum
PSO832G1140 Papaver somniferum
QL02p080561 Quercus lobata
RcHm_v2.0_Chr2g0169161 Rosa chinensis
RhsimUnG0055200 Rhododendron simsii
Sabra17G0069000 Salix brachista
SalBow1G4721 Salvia bowleyana
Sc11g0006930 Simmondsia chinensis
Sed0004091 Sechium edule
SEGI_10762 Sequoiadendron giganteum
SHI08813 Sapria himalayana
SHI08814 Sapria himalayana
SMO165G0052 Selaginella moellendorffii
Solyc01g009290.4 Solanum lycopersicum
Sopen01g004780 Solanum pennellii
Sp1g35350 Schrenkiella parvula
Sp3g03530 Schrenkiella parvula
Sp5g20800 Schrenkiella parvula
Sp7g01800 Schrenkiella parvula
Sp7g07820 Schrenkiella parvula
SpUn0485_0020 Schrenkiella parvula
TAR305G0002 Trochodendron aralioides
TAR481G0009 Trochodendron aralioides
TAR622G0275 Trochodendron aralioides
THA.LOC104811064 Tarenaya hassleriana
Thecc.04G074400 Theobroma cacao
Thhalv10020725m.g Eutrema salsugineum
Thhalv10028283m.g Eutrema salsugineum
TPR.G10385 Trifolium pratense
TPR.G73 Trifolium pratense
TWI60G0005 Tripterygium wilfordii
unitig_578.g15969 Utricularia gibba
vmacro05738 Vaccinium macrocarpon
VMungo0720G0008 Vigna mungo
Zm00001eb205260 Zea mays

User provided reference genes

Program Settings