Gene: Pp3c21_6910

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c21_6910
  • Transcript Identifier Pp3c21_6910V3.2
  • Gene Type Coding gene
  • Location Chr21 : 4167107-4169963 : negative

Gene Family Information

  • ID HOM05D004526
  • #Genes/#Species 159/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c21_6910V3.2
  • pacid 32916648
  • alias Phpat.021G022900
  • alias Phypa_119032
  • alias Pp1s27_374V6
  • uniprot A9RTM0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048827
ISO
PLAZA Integrative Orthologyphyllome development AT3G04680
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G04680
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G04680
GO:0006396
IBA
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0006388
IBA
GOA DatabasetRNA splicing, via endonucleolytic cleavage and ligation
GO:0006378
IBA
GOA DatabasemRNA polyadenylation
GO:0031124
IEA
GOA DatabasemRNA 3'-end processing
GO:0031124
IEA
InterPromRNA 3'-end processing
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0016310
IEA
GOA Databasephosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G04680
GO:0051731
IBA
IEA
GOA Databasepolynucleotide 5'-hydroxyl-kinase activity
GO:0051731
IEA
InterPropolynucleotide 5'-hydroxyl-kinase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005849
IEA
GOA DatabasemRNA cleavage factor complex
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010655 Pre-mRNA cleavage complex subunit Clp1, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR032319 Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
IPR038238 Clp1, C-terminal domain superfamily
IPR045116 Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3
Mapman id Description
16.3.1.5.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Clp1