Gene: Sc11g0006930

General Information

Structural Information

  • Species Simmondsia chinensis
  • Gene Identifier Sc11g0006930
  • Transcript Identifier Sc11g0006930.05
  • Gene Type Coding gene
  • Location GWHAASQ00000011 : 35402077-35410667 : positive

Gene Family Information

  • ID HOM05D004526
  • #Genes/#Species 159/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sc11g0006930.05

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031124
IEA
InterPromRNA 3'-end processing
GO:0006396
IEA
InterProRNA processing
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G04680
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G04680
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT3G04680
GO:0048827
ISO
PLAZA Integrative Orthologyphyllome development AT3G04680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051731
IEA
InterPropolynucleotide 5'-hydroxyl-kinase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G04680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G04680
GO:0005849
ISO
PLAZA Integrative OrthologymRNA cleavage factor complex AT3G04680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010655 Pre-mRNA cleavage complex subunit Clp1, C-terminal
IPR032319 Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR032324 Clp1, N-terminal beta-sandwich domain
IPR045116 Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3
IPR038238 Clp1, C-terminal domain superfamily
IPR038239 Clp1, N-terminal beta-sandwich domain superfamily
Mapman id Description
16.3.1.5.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Clp1