Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38500 Brassica napus
A06p37730 Brassica napus
A09p05140 Brassica napus
Aa31LG11G8870 Aethionema arabicum
Aa31LG5G15380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.800 Anthoceros agrestis
Actinidia05751 Actinidia chinensis
Actinidia30912 Actinidia chinensis
Actinidia33828 Actinidia chinensis
Actinidia33829 Actinidia chinensis
Ah.06g192840 Amaranthus hybridus
Ah.09g231900 Amaranthus hybridus
AL3G15450 Arabidopsis lyrata
AL6G40030 Arabidopsis lyrata
AL6G40050 Arabidopsis lyrata
AL7G48810 Arabidopsis lyrata
AL7G49140 Arabidopsis lyrata
Aqoxy2G03112 Aquilegia oxysepala
Aqoxy5G00645 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0BY36D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1D22H7 Arachis hypogaea
AT3G05060 Arabidopsis thaliana
AT5G27120 Arabidopsis thaliana
AT5G27140 Arabidopsis thaliana
ATR0665G227 Amborella trichopoda
Atru.chr1.4168 Acer truncatum
AUR62000941 Chenopodium quinoa
AUR62005026 Chenopodium quinoa
BcaB04g19651 Brassica carinata
BcaB07g34189 Brassica carinata
BcaC03g17771 Brassica carinata
BcaC04g23700 Brassica carinata
BcaC04g23701 Brassica carinata
BcaC04g23703 Brassica carinata
BcaNung04266 Brassica carinata
BolC2t11855H Brassica oleracea
BolC7t44585H Brassica oleracea
BolC9t53484H Brassica oleracea
BraA02t08828Z Brassica rapa
BraA06t26692Z Brassica rapa
BraA09t36153Z Brassica rapa
C02p57850 Brassica napus
C07p40500 Brassica napus
C09p05550 Brassica napus
CAN.G4.12 Capsicum annuum
CAN.G694.10 Capsicum annuum
CAN.G749.29 Capsicum annuum
CANSAT54G0025 Cannabis sativa
CARHR079390 Cardamine hirsuta
CARHR185770 Cardamine hirsuta
CARHR213640 Cardamine hirsuta
CARHR213650 Cardamine hirsuta
Carub.0003s0431 Capsella rubella
Carub.0006s2535 Capsella rubella
Carub.0006s2538 Capsella rubella
Ca_20906_v3 Cicer arietinum L.
CBR_g27745 Chara braunii
CBR_g49712 Chara braunii
Cc07_g18220 Coffea canephora
CDE12G0355 Ceratophyllum demersum
Cfa002871 Carpinus fangiana
Ciclev10000758m.g Citrus clementina
Ciclev10031140m.g Citrus clementina
CiPaw.07G010000 Carya illinoinensis
CiPaw.07G010200 Carya illinoinensis
ClCG02G016300 Citrullus lanatus
COL.COLO4_13628 Corchorus olitorius
Cpa.g.c28523.1 Carica papaya
Cpa.g.c28523.2 Carica papaya
Cre10.g441400 Chlamydomonas reinhardtii
CsaV3_2G004440 Cucumis sativus L.
CSS0017797 Camellia sinensis var. sinensis
CSS0026520 Camellia sinensis var. sinensis
CSS0048459 Camellia sinensis var. sinensis
DCAR_003150 Daucus carota
DCAR_007811 Daucus carota
Dinv03355 Davidia involucrata
Dinv04272 Davidia involucrata
Duzib128G0087 Durio zibethinus
Duzib177G0757 Durio zibethinus
ECA236G2458 Erigeron canadensis
EL10Ac4g09229 Beta vulgaris
EL10Ac8g19379 Beta vulgaris
Eucgr.H04416 Eucalyptus grandis
FAN02G4374 Fragaria x ananassa
FAN05G0120 Fragaria x ananassa
FAN05G4463 Fragaria x ananassa
FAN09G2140 Fragaria x ananassa
FAN09G3633 Fragaria x ananassa
FAN14G1669 Fragaria x ananassa
FvH4_6g04090 Fragaria vesca
Glyma.11G114300 Glycine max
Glyma.12G040200 Glycine max
Gohir.A08G213700 Gossypium hirsutum
Gohir.A11G257400 Gossypium hirsutum
Gohir.A13G171550 Gossypium hirsutum
Gohir.D08G230800 Gossypium hirsutum
Gohir.D11G267300 Gossypium hirsutum
Gohir.D13G177100 Gossypium hirsutum
Gorai.004G245100 Gossypium raimondii
Gorai.007G287100 Gossypium raimondii
Gorai.013G202500 Gossypium raimondii
GSVIVG01021905001 Vitis vinifera
HanXRQChr07g0197841 Helianthus annuus
HanXRQChr14g0451691 Helianthus annuus
Haze_25199 Corylus avellana
Haze_26724 Corylus avellana
HPP92_012282 Vanilla planifolia
HPP92_012290 Vanilla planifolia
Hund14661 Selenicereus undatus
Hund22086 Selenicereus undatus
Lalb_Chr01g0002321 Lupinus albus
Lalb_Chr03g0025521 Lupinus albus
Lalb_Chr19g0138821 Lupinus albus
Lj3g0002735 Lotus japonicus
Lj7A481T49 Lonicera japonica
Lj9A673T47 Lonicera japonica
Lsat_1_v5_gn_1_62020 Lactuca sativa
Lsat_1_v5_gn_2_95881 Lactuca sativa
Manes.08G126100 Manihot esculenta
Manes.09G158900 Manihot esculenta
Manes.14G155400 Manihot esculenta
Mapoly0028s0114 Marchantia polymorpha
MBI10_g32325_MAGBIO Magnolia biondii
MBI16_g04494_MAGBIO Magnolia biondii
MCO01G709 Micromonas commoda
MD04G1216600 Malus domestica
MD12G1233200 Malus domestica
Medtr4g070910 Medicago truncatula
Medtr5g010260 Medicago truncatula
MELO3C004350.2 Cucumis melo
Migut.H00753 Erythranthe guttata
Migut.H00754 Erythranthe guttata
Nitab4.5_0001498g0030 Nicotiana tabacum
Nitab4.5_0006530g0030 Nicotiana tabacum
Nn3g21323 Nelumbo nucifera
Nn4g25988 Nelumbo nucifera
Oeu014982.1 Olea europaea
Os03g0350100 Oryza sativa ssp. japonica
Os03g0350300 Oryza sativa ssp. japonica
Peaxi162Scf00071g02312 Petunia axillaris
PGR119G1634 Punica granatum
PGSC0003DMG400006104 Solanum tuberosum
PGSC0003DMG400023353 Solanum tuberosum
Phvul.011G042200 Phaseolus vulgaris
Potri.005G045600 Populus trichocarpa
Potri.013G032300 Populus trichocarpa
Pp3c11_14260 Physcomitrium patens
Pp3c2_28380 Physcomitrium patens
Pp3c7_18900 Physcomitrium patens
PRCOL_00000012 Prasinoderma coloniale
Prupe.6G336300 Prunus persica
Psat2g182360 Pisum sativum
Psat7g140200 Pisum sativum
PSO170G5816 Papaver somniferum
PSO210G6000 Papaver somniferum
PSO423G0040 Papaver somniferum
PSO423G0294 Papaver somniferum
PSO478G0899 Papaver somniferum
PSO782G1109 Papaver somniferum
QL03p001096 Quercus lobata
RcHm_v2.0_Chr3g0452641 Rosa chinensis
Sabra05G0041900 Salix brachista
Sabra13G0032100 Salix brachista
Sc06g0003550 Simmondsia chinensis
Sc06g0003580 Simmondsia chinensis
Sed0008911 Sechium edule
Sed0022250 Sechium edule
SEGI_07896 Sequoiadendron giganteum
SEGI_23021 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35145 Striga asiatica
SGA_v2.0_scaffold250G45005 Striga asiatica
SMO116G0298 Selaginella moellendorffii
Solyc05g055880.4 Solanum lycopersicum
Solyc09g083080.4 Solanum lycopersicum
Sopen05g034280 Solanum pennellii
Sopen09g031960 Solanum pennellii
Sp2g20400 Schrenkiella parvula
Sp3g03890 Schrenkiella parvula
TAR362G0211 Trochodendron aralioides
TAR365G0043 Trochodendron aralioides
TAR633G2345 Trochodendron aralioides
THA.LOC104818657 Tarenaya hassleriana
THA.LOC104821697 Tarenaya hassleriana
Thecc.05G292200 Theobroma cacao
Thhalv10003966m.g Eutrema salsugineum
Thhalv10019711m.g Eutrema salsugineum
Thhalv10020473m.g Eutrema salsugineum
TPR.G16342 Trifolium pratense
TPR.G22166 Trifolium pratense
TPR.G23358 Trifolium pratense
TPR.G6703 Trifolium pratense
TWI12G1393 Tripterygium wilfordii
TWI36G0019 Tripterygium wilfordii
unitig_747.g22002 Utricularia gibba
vmacro19664 Vaccinium macrocarpon
vmacro21508 Vaccinium macrocarpon
VMungo1127G1099 Vigna mungo
Zm00001eb016780 Zea mays
Zm00001eb031420 Zea mays
Zm00001eb114100 Zea mays
Zm00001eb275560 Zea mays
Zm00001eb293910 Zea mays
Zm00001eb364220 Zea mays
Zm00001eb394750 Zea mays

User provided reference genes

Program Settings