Gene: Zm00001eb016780

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb016780
  • Transcript Identifier Zm00001eb016780_T001
  • Gene Type Coding gene
  • Location 1 : 59811236-59814693 : negative

Gene Family Information

  • ID HOM05D001386
  • #Genes/#Species 453/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb016780_T001
  • pid Zm00001eb016780_P001
  • uniprot A0A1D6PAC2
  • uniprot A0A1D6K328
  • uniprot K7VDW5
  • uniprot A0A1D6K324
  • uniprot A0A1D6K323
  • uniprot A0A1D6PAC8
  • uniprot A0A1D6PAC9
  • uniprot A0A317YFA8
  • uniprot A0A1D6K331
  • uniprot A0A1D6K329
  • entrez 100384739
  • refseq XM_008657431.1
  • refseq XP_008655653.1
  • refseq XM_008657438.1
  • refseq XP_008655660.1
  • V4_identifier Zm00001d029144

Descriptions

  • Description Zm00001e001659
  • Description Probable nucleolar protein 5-1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0016310
IEA
GOA Databasephosphorylation
GO:0006913
IEA
GOA Databasenucleocytoplasmic transport
GO:0042254
IEA
GOA Databaseribosome biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G27120
GO:0030515
IBA
IEA
GOA DatabasesnoRNA binding
GO:0030515
IEA
InterProsnoRNA binding
GO:0017056
IEA
GOA Databasestructural constituent of nuclear pore
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IEA
GOA Databasenuclear pore
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G27120
GO:0032040
IBA
IEA
GOA Databasesmall-subunit processome
GO:0032040
IEA
InterProsmall-subunit processome
GO:0031428
IBA
IEA
GOA Databasebox C/D RNP complex
GO:0031428
IEA
InterProbox C/D RNP complex
GO:0005730
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036070 Nop domain superfamily
IPR012976 NOSIC
IPR045056 Nucleolar protein Nop56/Nop58
IPR042239 Nop, C-terminal domain
IPR012974 NOP5, N-terminal
IPR002687 Nop domain
Mapman id Description
17.1.1.2.1.5.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.snoRNP scaffold component Nop58