Gene: TPR.G6703

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G6703
  • Transcript Identifier TPR.T6942
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG2 : 30756206-30759458 : positive

Gene Family Information

  • ID HOM05D001386
  • #Genes/#Species 453/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA6942.v2
  • id Tp57577_TGAC_v2_gene6703.v2
  • pacid 35969608
  • uniprot A0A2K3NZ39

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030515
IEA
GOA DatabasesnoRNA binding
GO:0030515
IEA
InterProsnoRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G27120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031428
IEA
GOA Databasebox C/D RNP complex
GO:0031428
IEA
InterProbox C/D RNP complex
GO:0032040
IEA
GOA Databasesmall-subunit processome
GO:0032040
IEA
InterProsmall-subunit processome
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G27120
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G27120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042239 Nop, C-terminal domain
IPR012976 NOSIC
IPR036070 Nop domain superfamily
IPR012974 NOP5, N-terminal
IPR045056 Nucleolar protein Nop56/Nop58
IPR002687 Nop domain
Mapman id Description
17.1.1.2.1.5.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.snoRNP scaffold component Nop58